Journal of Pathology Informatics Journal of Pathology Informatics
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Editorial: A tribute to Jeffrey A. Kant, MD, PhD
Alexis B Carter, Rama R Gullapalli, Jill M Hagenkord, Hyunseok P Kang, Federico A Monzon, Thomas M Williams
J Pathol Inform 2012, 3:47 (31 December 2012)
DOI:10.4103/2153-3539.105273  PMID:23372988
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Review Article: Whole slide imaging for educational purposes
Liron Pantanowitz, Janusz Szymas, Yukako Yagi, David Wilbur
J Pathol Inform 2012, 3:46 (20 December 2012)
DOI:10.4103/2153-3539.104908  PMID:23372987
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Review Article: Experience with multimodality telepathology at the University of Pittsburgh Medical Center
Liron Pantanowitz, Clayton A Wiley, Anthony Demetris, Andrew Lesniak, Ishtiaque Ahmed, William Cable, Lydia Contis, Anil V Parwani
J Pathol Inform 2012, 3:45 (20 December 2012)
DOI:10.4103/2153-3539.104907  PMID:23372986
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Review Article: Custom software development for use in a clinical laboratory
John H Sinard, Peter Gershkovich
J Pathol Inform 2012, 3:44 (20 December 2012)
DOI:10.4103/2153-3539.104906  PMID:23372985
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Research Article: Mouse cursor movement and eye tracking data as an indicator of pathologists' attention when viewing digital whole slide images
Vignesh Raghunath, Melissa O Braxton, Stephanie A Gagnon, Tad T Brunyé, Kimberly H Allison, Lisa M Reisch, Donald L Weaver, Joann G Elmore, Linda G Shapiro
J Pathol Inform 2012, 3:43 (20 December 2012)
DOI:10.4103/2153-3539.104905  PMID:23372984
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Original Article: Tissue microarray design and construction for scientific, industrial and diagnostic use
Daniela Pilla, Francesca M Bosisio, Roberto Marotta, Stefano Faggi, Paolo Forlani, Maurizio Falavigna, Ida Biunno, Emanuele Martella, Pasquale De Blasio, Simone Borghesi, Giorgio Cattoretti
J Pathol Inform 2012, 3:42 (20 December 2012)
DOI:10.4103/2153-3539.104904  PMID:23372983
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Technical note: Pathology informatics fellowship retreats: The use of interactive scenarios and case studies as pathology informatics teaching tools
Roy E Lee, David S McClintock, Ulysses J Balis, Jason M Baron, Michael J Becich, Bruce A Beckwith, Victor B Brodsky, Alexis B Carter, Anand S Dighe, Mehrvash Haghighi, Jason D Hipp, Walter H Henricks, Jiyeon Y Kim, Veronica E Klepseis, Frank C Kuo, William J Lane, Bruce P Levy, Maristela L Onozato, Seung L Park, John H Sinard, Mark J Tuthill, John R Gilbertson
J Pathol Inform 2012, 3:41 (28 November 2012)
DOI:10.4103/2153-3539.103995  PMID:23248762
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Review Article: Next generation sequencing in clinical medicine: Challenges and lessons for pathology and biomedical informatics Highly accessed article
Rama R Gullapalli, Ketaki V Desai, Lucas Santana-Santos, Jeffrey A Kant, Michael J Becich
J Pathol Inform 2012, 3:40 (31 October 2012)
DOI:10.4103/2153-3539.103013  PMID:23248761
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Commentary: Evaluation of whole slide imaging for routine surgical pathology: Looking through a broader scope
Walter H Henricks
J Pathol Inform 2012, 3:39 (31 October 2012)
DOI:10.4103/2153-3539.103009  PMID:23248760
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Book Review: Review of "Pathology informatics: Theory and practice" by L Pantanowitz, JM Tuthill, and UGJ Balis (Editors)
Myra L Wilkerson
J Pathol Inform 2012, 3:38 (31 October 2012)
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Abstract: Abstracts: Pathology Informatics 2012

J Pathol Inform 2012, 3:37 (9 October 2012)
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Research Article: Feasibility of telecytopathology for rapid preliminary diagnosis of ultrasound-guided fine needle aspiration of axillary lymph nodes in a remote breast care center
Kamal K Khurana, Andra Kovalovsky, Deepa Masrani
J Pathol Inform 2012, 3:36 (28 September 2012)
DOI:10.4103/2153-3539.101803  PMID:23243554
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Research Article: Use of contextual inquiry to understand anatomic pathology workflow: Implications for digital pathology adoption
Jonhan Ho, Orly Aridor, Anil V Parwani
J Pathol Inform 2012, 3:35 (28 September 2012)
DOI:10.4103/2153-3539.101794  PMID:23243553
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Original Article: Interactive case vignettes utilizing simulated pathologist-clinician encounters with whole slide imaging and video tutorials of whole slide scans improves student understanding of disease processes
Adam J Horn, Donna Czarnecki, Subodh M Lele
J Pathol Inform 2012, 3:34 (28 September 2012)
DOI:10.4103/2153-3539.101786  PMID:23243552
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Research Article: The analysis of image feature robustness using cometcloud
Xin Qi, Hyunjoo Kim, Fuyong Xing, Manish Parashar, David J Foran, Lin Yang
J Pathol Inform 2012, 3:33 (28 September 2012)
DOI:10.4103/2153-3539.101782  PMID:23248759
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Original Article: Use of a wiki as an interactive teaching tool in pathology residency education: Experience with a genomics, research, and informatics in pathology course Highly accessed article
Seung Park, Anil Parwani, Trevor MacPherson, Liron Pantanowitz
J Pathol Inform 2012, 3:32 (30 August 2012)
DOI:10.4103/2153-3539.100366  PMID:23024891
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Original Article: A core curriculum for clinical fellowship training in pathology informatics
David S McClintock, Bruce P Levy, William J Lane, Roy E Lee, Jason M Baron, Veronica E Klepeis, Maristela L Onozato, JiYeon Kim, Anand S Dighe, Bruce A Beckwith, Frank Kuo, Stephen Black-Schaffer, John R Gilbertson
J Pathol Inform 2012, 3:31 (30 August 2012)
DOI:10.4103/2153-3539.100364  PMID:23024890
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Original Article: Different tracks for pathology informatics fellowship training: Experiences of and input from trainees in a large multisite fellowship program
Bruce P Levy, David S McClintock, Roy E Lee, William J Lane, Veronica E Klepeis, Jason M Baron, Maristela L Onozato, JiYeon Kim, Victor Brodsky, Bruce Beckwith, Frank Kuo, John R Gilbertson
J Pathol Inform 2012, 3:30 (30 August 2012)
DOI:10.4103/2153-3539.100362  PMID:23024889
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Original Article: Experience with CellaVision DM96 for peripheral blood differentials in a large multi-center academic hospital system
Marian A Rollins-Raval, Jay S Raval, Lydia Contis
J Pathol Inform 2012, 3:29 (25 August 2012)
DOI:10.4103/2153-3539.100154  PMID:23024888
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Original Article: Dynamic nonrobotic telemicroscopy via skype: A cost effective solution to teleconsultation
Sahussapont J Sirintrapun, Adela Cimic
J Pathol Inform 2012, 3:28 (25 August 2012)
DOI:10.4103/2153-3539.100150  PMID:23024887
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Original Article: Diagnosis of dysplasia in upper gastro-intestinal tract biopsies through digital microscopy
Dorina Gui, Galen Cortina, Bita Naini, Steve Hart, Garrett Gerney, David Dawson, Sarah Dry
J Pathol Inform 2012, 3:27 (25 August 2012)
DOI:10.4103/2153-3539.100149  PMID:23024886
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Research Article: Utilization and utility of clinical laboratory reports with graphical elements
Brian H Shirts, Nichole Larsen, Brian R Jackson
J Pathol Inform 2012, 3:26 (25 August 2012)
DOI:10.4103/2153-3539.100145  PMID:23024885
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Research Article: ImageJS: Personalized, participated, pervasive, and reproducible image bioinformatics in the web browser
Jonas S Almeida, Egiebade E Iriabho, Vijaya L Gorrepati, Sean R Wilkinson, Alexander Grüneberg, David E Robbins, James R Hackney
J Pathol Inform 2012, 3:25 (20 July 2012)
DOI:10.4103/2153-3539.98813  PMID:22934238
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Original Article: Image microarrays derived from tissue microarrays (IMA-TMA): New resource for computer-aided diagnostic algorithm development
Jennifer A Hipp, Jason D Hipp, Megan Lim, Gaurav Sharma, Lauren B Smith, Stephen M Hewitt, Ulysses G. J. Balis
J Pathol Inform 2012, 3:24 (12 July 2012)
DOI:10.4103/2153-3539.98168  PMID:22934237
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Technical note: The feasibility of using natural language processing to extract clinical information from breast pathology reports
Julliette M Buckley, Suzanne B Coopey, John Sharko, Fernanda Polubriaginof, Brian Drohan, Ahmet K Belli, Elizabeth M. H. Kim, Judy E Garber, Barbara L Smith, Michele A Gadd, Michelle C Specht, Constance A Roche, Thomas M Gudewicz, Kevin S Hughes
J Pathol Inform 2012, 3:23 (30 June 2012)
DOI:10.4103/2153-3539.97788  PMID:22934236
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Review Article: Review of advanced imaging techniques
Yu Chen, Chia-Pin Liang, Yang Liu, Andrew H Fischer, Anil V Parwani, Liron Pantanowitz
J Pathol Inform 2012, 3:22 (28 May 2012)
PMID:22754737
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Letter: Managing beyond the laboratory information system
Gregory J Buffone
J Pathol Inform 2012, 3:21 (24 May 2012)
DOI:10.4103/2153-3539.96156  PMID:22754736
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Original Article: Computer-assisted imaging algorithms facilitate histomorphometric quantification of kidney damage in rodent renal failure models
Marcin Klapczynski, Gerard D Gagne, Sherry J Morgan, Kelly J Larson, Bruce E LeRoy, Eric A Blomme, Bryan F Cox, Eugene W Shek
J Pathol Inform 2012, 3:20 (28 April 2012)
DOI:10.4103/2153-3539.95456  PMID:22616032
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Research Article: Estrogen receptor testing and 10-year mortality from breast cancer: A model for determining testing strategy
Christopher Naugler
J Pathol Inform 2012, 3:19 (28 April 2012)
DOI:10.4103/2153-3539.95452  PMID:22616031
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Technical note: Investigation into diagnostic agreement using automated computer-assisted histopathology pattern recognition image analysis
Joshua D Webster, Aleksandra M Michalowski, Jennifer E Dwyer, Kara N Corps, Bih-Rong Wei, Tarja Juopperi, Shelley B Hoover, R Mark Simpson
J Pathol Inform 2012, 3:18 (18 April 2012)
DOI:10.4103/2153-3539.95130  PMID:22616030
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Research Article: Compressing pathology whole-slide images using a human and model observer evaluation
Elizabeth A Krupinski, Jeffrey P Johnson, Stacey Jaw, Anna R Graham, Ronald S Weinstein
J Pathol Inform 2012, 3:17 (18 April 2012)
DOI:10.4103/2153-3539.95129  PMID:22616029
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Research Article: Changes, disruption and innovation: An investigation of the introduction of new health information technology in a microbiology laboratory
George Toouli, Andrew Georgiou, Johanna Westbrook
J Pathol Inform 2012, 3:16 (18 April 2012)
DOI:10.4103/2153-3539.95128  PMID:22616028
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Review Article: Handheld computing in pathology
Seung Park, Anil Parwani, Mahadev Satyanarayanan, Liron Pantanowitz
J Pathol Inform 2012, 3:15 (18 April 2012)
DOI:10.4103/2153-3539.95127  PMID:22616027
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Commentary: Comment on "Quality evaluation of microscopy and scanned histological images for diagnostic purposes": Are scanners better than microscopes?
Yukako Yagi, Liron Pantanowitz
J Pathol Inform 2012, 3:14 (18 April 2012)
PMID:22616026
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Research Article: Isolation and two-step classification of normal white blood cells in peripheral blood smears
Nisha Ramesh, Bryan Dangott, Mohammed E Salama, Tolga Tasdizen
J Pathol Inform 2012, 3:13 (16 March 2012)
DOI:10.4103/2153-3539.93895  PMID:22530181
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Commentary: Board certification for pathologists in clinical informatics: Are you a lumper or a splitter?
Alexis B Carter
J Pathol Inform 2012, 3:12 (16 March 2012)
DOI:10.4103/2153-3539.93894  PMID:22530180
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Original Article: Clinical fellowship training in pathology informatics: A program description
John R Gilbertson, David S McClintock, Roy E Lee, Maristela Onozato, Frank C Kuo, Bruce A Beckwith, Yukako Yagi, Anand S Dighe, Tom M Gudewicz, Long P Le, David C Wilbur, Ji Yeon Kim, Victor B Brodsky, Stephen Black-Schaffer
J Pathol Inform 2012, 3:11 (16 March 2012)
DOI:10.4103/2153-3539.93893  PMID:22530179
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Original Article: Integration of digital gross pathology images for enterprise-wide access
Milon Amin, Gaurav Sharma, Anil V Parwani, Ralph Anderson, Brian J Kolowitz, Anthony Piccoli, Rasu B Shrestha, Gonzalo Romero Lauro, Liron Pantanowitz
J Pathol Inform 2012, 3:10 (16 March 2012)
DOI:10.4103/2153-3539.93892  PMID:22530178
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Original Article: Referenceless image quality evaluation for whole slide imaging
Noriaki Hashimoto, Pinky A Bautista, Masahiro Yamaguchi, Nagaaki Ohyama, Yukako Yagi
J Pathol Inform 2012, 3:9 (16 March 2012)
DOI:10.4103/2153-3539.93891  PMID:22530177
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Editorial: Tryggo: Old norse for truth - The real truth about ground truth: New insights into the challenges of generating ground truth maps for WSI CAD algorithm evaluation
Jason D Hipp, Steven C Smith, Jeffrey Sica, David Lucas, Jennifer A Hipp, Lakshmi P Kunju, Ulysses J Balis
J Pathol Inform 2012, 3:8 (16 March 2012)
DOI:10.4103/2153-3539.93890  PMID:22530176
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Book Review: Review of "Informatics in Medical Imaging" by Kagadis GC, Langer SG (Editors)
Claudia Mello-Thoms
J Pathol Inform 2012, 3:7 (29 February 2012)
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Letter: All aboard: Cytotechnology student training in pathology informatics
Judith Modery, Walid E Khalbuss, Liron Pantanowitz
J Pathol Inform 2012, 3:6 (29 February 2012)
DOI:10.4103/2153-3539.93403  PMID:22439126
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Original Article: How useful are delta checks in the 21st century? A stochastic-dynamic model of specimen mix-up and detection
Katie Ovens, Christopher Naugler
J Pathol Inform 2012, 3:5 (29 February 2012)
DOI:10.4103/2153-3539.93402  PMID:22439125
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Original Article: Full field optical coherence tomography can identify spermatogenesis in a rodent sertoli-cell only model
Ranjith Ramasamy, Joshua Sterling, Maryem Manzoor, Bekheit Salamoon, Manu Jain, Erik Fisher, Phillip S Li, Peter N Schlegel, Sushmita Mukherjee
J Pathol Inform 2012, 3:4 (29 February 2012)
DOI:10.4103/2153-3539.93401  PMID:22439124
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Original Article: A novel strategy for evaluating the effects of an electronic test ordering alert message: Optimizing cardiac marker use
Jason M Baron, Kent B Lewandrowski, Irina K Kamis, Balaji Singh, Sidi M Belkziz, Anand S Dighe
J Pathol Inform 2012, 3:3 (29 February 2012)
DOI:10.4103/2153-3539.93400  PMID:22439123
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Original Article: Virtual microscopy using whole-slide imaging as an enabler for teledermatopathology: A paired consultant validation study
Ayman Al Habeeb, Andrew Evans, Danny Ghazarian
J Pathol Inform 2012, 3:2 (29 February 2012)
DOI:10.4103/2153-3539.93399  PMID:22439122
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Research Article: A pathologist-in-the-loop IHC antibody test selection using the entropy-based probabilistic method
Dmitriy Shin, Gerald Arthur, Charles Caldwell, Mihail Popescu, Marius Petruc, Alberto Diaz-Arias, Chi-Ren Shyu
J Pathol Inform 2012, 3:1 (29 February 2012)
DOI:10.4103/2153-3539.93393  PMID:22439121
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Symposium - Original Research: Graphical processing unit implementation of an integrated shape-based active contour: Application to digital pathology
Sahirzeeshan Ali, Anant Madabhushi
J Pathol Inform 2011, 2:13 (19 January 2012)
DOI:10.4103/2153-3539.92029  
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Symposium - Original Research: Learning histopathological patterns
Andreas Kĺrsnäs, Anders L Dahl, Rasmus Larsen
J Pathol Inform 2011, 2:12 (19 January 2012)
DOI:10.4103/2153-3539.92033  
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Symposium - Original Research: A comparison of sampling strategies for histological image analysis
André Homeyer, Andrea Schenk, Uta Dahmen, Olaf Dirsch, Hai Huang, Horst K Hahn
J Pathol Inform 2011, 2:11 (19 January 2012)
DOI:10.4103/2153-3539.92034  
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Symposium - Original Research: Biomechanical model-based deformable registration of MRI and histopathology for clinical prostatectomy
Navid Samavati, Deirdre M McGrath, Jenny Lee, Theodorus van der Kwast, Michael Jewett, Cynthia Ménard, Kristy K Brock
J Pathol Inform 2011, 2:10 (19 January 2012)
DOI:10.4103/2153-3539.92035  
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Symposium - Original Research: Interactive registration of 2D histology and 3D CT data for assessment of radiofrequency ablation treatment
Matthias Seise, Tuomas Alhonnoro, Marina Kolesnik
J Pathol Inform 2011, 2:9 (19 January 2012)
DOI:10.4103/2153-3539.92036  
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Symposium - Original Research: Global error minimization in image mosaicing using graph connectivity and its applications in microscopy
Parmeshwar Khurd, Leo Grady, Rafiou Oketokoun, Hari Sundar, Tejas Gajera, Summer Gibbs-Strauss, John V Frangioni, Ali Kamen
J Pathol Inform 2011, 2:8 (19 January 2012)
DOI:10.4103/2153-3539.92039  
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Symposium - Original Research: Atlas-guided correction of brain histology distortion
Xi Qiu, Lin Shi, Tony Pridmore, Alain Pitiot, Defeng Wang
J Pathol Inform 2011, 2:7 (19 January 2012)
DOI:10.4103/2153-3539.92038  
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Symposium - Original Research: Feasibility analysis of high resolution tissue image registration using 3-D synthetic data
Yachna Sharma, Richard A Moffitt, Todd H Stokes, Qaiser Chaudry, May D Wang
J Pathol Inform 2011, 2:6 (19 January 2012)
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Symposium - Original Research: A fully automated approach to prostate biopsy segmentation based on level-set and mean filtering
Juan Vidal, Gloria Bueno, John Galeotti, Marcial García-Rojo, Fernanda Relea, Oscar Déniz
J Pathol Inform 2011, 2:5 (19 January 2012)
DOI:10.4103/2153-3539.92032  
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Symposium - Original Research: Automatic annotation of histopathological images using a latent topic model based on non-negative matrix factorization
Angel Cruz-Roa, Gloria Díaz, Eduardo Romero, Fabio A González
J Pathol Inform 2011, 2:4 (19 January 2012)
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Symposium - Original Research: Prostate cancer detection: Fusion of cytological and textural features
Kien Nguyen, Anil K Jain, Bikash Sabata
J Pathol Inform 2011, 2:3 (19 January 2012)
DOI:10.4103/2153-3539.92030  
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Symposium - Original Research: Local isotropic phase symmetry measure for detection of beta cells and lymphocytes
Manohar Kuse, Yi-Fang Wang, Vinay Kalasannavar, Michael Khan, Nasir Rajpoot
J Pathol Inform 2011, 2:2 (19 January 2012)
DOI:10.4103/2153-3539.92028  
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Symposium - Original Research: Multi-field-of-view strategy for image-based outcome prediction of multi-parametric estrogen receptor-positive breast cancer histopathology: Comparison to Oncotype DX
Ajay Basavanhally, Michael Feldman, Natalie Shih, Carolyn Mies, John Tomaszewski, Shridar Ganesan, Anant Madabhushi
J Pathol Inform 2011, 2:1 (19 January 2012)
DOI:10.4103/2153-3539.92027  
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