Journal of Pathology Informatics Journal of Pathology Informatics
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Research Article: Improving the creation and reporting of structured findings during digital pathology review
Ida Cervin, Jesper Molin, Claes Lundstrom
J Pathol Inform 2016, 7:32 (26 July 2016)
DOI:10.4103/2153-3539.186917  
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Technical Note: NDER: A novel web application using annotated whole slide images for rapid improvements in human pattern recognition
Nicholas P Reder, Daniel Glasser, Suzanne M Dintzis, Mara H Rendi, Rochelle L Garcia, Jonathan C Henriksen, Mark R Kilgore
J Pathol Inform 2016, 7:31 (26 July 2016)
DOI:10.4103/2153-3539.186913  
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Research Article: Comparing whole slide digital images versus traditional glass slides in the detection of common microscopic features seen in dermatitis
Nikki S Vyas, Michael Markow, Carlos Prieto-Granada, Sudeep Gaudi, Leslie Turner, Paul Rodriguez-Waitkus, Jane L Messina, Drazen M Jukic
J Pathol Inform 2016, 7:30 (26 July 2016)
DOI:10.4103/2153-3539.186909  
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Original Article: Deep learning for digital pathology image analysis: A comprehensive tutorial with selected use cases
Andrew Janowczyk, Anant Madabhushi
J Pathol Inform 2016, 7:29 (26 July 2016)
DOI:10.4103/2153-3539.186902  
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Original Article: Clinically-inspired automatic classification of ovarian carcinoma subtypes
Aicha BenTaieb, Masoud S Nosrati, Hector Li-Chang, David Huntsman, Ghassan Hamarneh
J Pathol Inform 2016, 7:28 (26 July 2016)
DOI:10.4103/2153-3539.186899  
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Research Article: Pathology informatics essentials for residents: A flexible informatics curriculum linked to accreditation council for graduate medical education milestones
Walter H Henricks, Donald S Karcher, James H Harrison, John H Sinard, Michael W Riben, Philip J Boyer, Sue Plath, Arlene Thompson, Liron Pantanowitz
J Pathol Inform 2016, 7:27 (6 July 2016)
DOI:10.4103/2153-3539.185673  
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Original Article: Evaluation of panoramic digital images using Panoptiq for frozen section diagnosis
Dinesh Pradhan, Sara E Monaco, Anil V Parwani, Ishtiaque Ahmed, Jon Duboy, Liron Pantanowitz
J Pathol Inform 2016, 7:26 (4 May 2016)
DOI:10.4103/2153-3539.181770  PMID:27217976
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Research Article: Pitfalls in the use of whole slide imaging for the diagnosis of central nervous system tumors: A pilot study in surgical neuropathology
Melike Pekmezci, Sanem Pinar Uysal, Yelda Orhan, Tarik Tihan, Han Sung Lee
J Pathol Inform 2016, 7:25 (4 May 2016)
DOI:10.4103/2153-3539.181769  PMID:27217975
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Technical Note: A real-time dashboard for managing pathology processes
Fawaz Halwani, Wei Chen Li, Diponkar Banerjee, Lysanne Lessard, Daniel Amyot, Wojtek Michalowski, Randy Giffen
J Pathol Inform 2016, 7:24 (4 May 2016)
DOI:10.4103/2153-3539.181768  PMID:27217974
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Original Article: Digital pathology and anatomic pathology laboratory information system integration to support digital pathology sign-out
Huazhang Guo, Joe Birsa, Navid Farahani, Douglas J Hartman, Anthony Piccoli, Matthew O'Leary, Jeffrey McHugh, Mark Nyman, Curtis Stratman, Vanja Kvarnstrom, Samuel Yousem, Liron Pantanowitz
J Pathol Inform 2016, 7:23 (4 May 2016)
DOI:10.4103/2153-3539.181767  PMID:27217973
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Original Article: Exploring virtual reality technology and the Oculus Rift for the examination of digital pathology slides
Navid Farahani, Robert Post, Jon Duboy, Ishtiaque Ahmed, Brian J Kolowitz, Teppituk Krinchai, Sara E Monaco, Jeffrey L Fine, Douglas J Hartman, Liron Pantanowitz
J Pathol Inform 2016, 7:22 (4 May 2016)
DOI:10.4103/2153-3539.181766  PMID:27217972
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Research Article: Removing defocused objects from single focal plane scans of cytological slides
David Friedrich, Alfred Böcking, Dietrich Meyer-Ebrecht, Dorit Merhof
J Pathol Inform 2016, 7:21 (4 May 2016)
DOI:10.4103/2153-3539.181765  PMID:27217971
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Original Article: Validation of break-apart and fusion MYC probes using a digital fluorescence in situ hybridization capture and imaging system
Michael Liew, Leslie Rowe, Parker W Clement, Rodney R Miles, Mohamed E Salama
J Pathol Inform 2016, 7:20 (4 May 2016)
DOI:10.4103/2153-3539.181764  PMID:27217970
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Commentary: Commentary: Has pathology gone to the "birds" because we have just been "winging" it?
Liron Pantanowitz, Eric Glassy
J Pathol Inform 2016, 7:19 (4 May 2016)
DOI:10.4103/2153-3539.181763  PMID:27217969
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Editorial: An industry perspective: An update on the adoption of whole slide imaging
Michael C Montalto
J Pathol Inform 2016, 7:18 (11 April 2016)
DOI:10.4103/2153-3539.180014  PMID:27141323
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Research Article: Empirical comparison of color normalization methods for epithelial-stromal classification in H and E images
Amit Sethi, Lingdao Sha, Abhishek Ramnath Vahadane, Ryan J Deaton, Neeraj Kumar, Virgilia Macias, Peter H Gann
J Pathol Inform 2016, 7:17 (11 April 2016)
DOI:10.4103/2153-3539.179984  PMID:27141322
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Book Review: Review of "Practical Informatics for Cytopathology"
George G Birdsong
J Pathol Inform 2016, 7:16 (11 April 2016)
DOI:10.4103/2153-3539.179909  
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Research Article: Quantitative analysis of myocardial tissue with digital autofluorescence microscopy
Thomas Jensen, Henrik Holten-Rossing, Ida M H Svendsen, Christina Jacobsen, Ben Vainer
J Pathol Inform 2016, 7:15 (11 April 2016)
DOI:10.4103/2153-3539.179908  PMID:27141321
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Original Article: Perceptions of pathology informatics by non-informaticist pathologists and trainees
Addie Walker, Christopher Garcia, Jason M Baron, Thomas M Gudewicz, John R Gilbertson, Walter H Henricks, Roy E Lee
J Pathol Inform 2016, 7:14 (11 April 2016)
DOI:10.4103/2153-3539.179904  PMID:27141320
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Technical Note: Pathology interface for the molecular analysis of tissue by mass spectrometry
Jeremy L Norris, Tina Tsui, Danielle B Gutierrez, Richard M Caprioli
J Pathol Inform 2016, 7:13 (11 April 2016)
DOI:10.4103/2153-3539.179903  PMID:27141319
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Symposium: Summary of third Nordic symposium on digital pathology
Claes Lundstrom, Marie Waltersson, Anders Persson, Darren Treanor
J Pathol Inform 2016, 7:12 (11 April 2016)
DOI:10.4103/2153-3539.179902  PMID:27141318
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Research Article: Consultation on urological specimens from referred cancer patients using real-time digital microscopy: Optimizing the workflow
Henrik Holten-Rossing, Lise Grupe Larsen, Birgitte Grønkær Toft, Anand Loya, Ben Vainer
J Pathol Inform 2016, 7:11 (1 March 2016)
DOI:10.4103/2153-3539.177689  PMID:27076989
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Original Article: Comparison of the diagnostic utility of digital pathology systems for telemicrobiology
Daniel D Rhoads, Nadia F Habib-Bein, Rahman S Hariri, Douglas J Hartman, Sara E Monaco, Andrew Lesniak, Jon Duboy, Mohamed El-Sayed Salama, Liron Pantanowitz
J Pathol Inform 2016, 7:10 (1 March 2016)
DOI:10.4103/2153-3539.177687  PMID:27076988
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Commentary: Commentary: Can pathologists interpret digital images as well as they interpret microscope slides?
Thomas W Bauer
J Pathol Inform 2016, 7:9 (1 March 2016)
DOI:10.4103/2153-3539.177683  PMID:27076987
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Original Article: Utilization of virtual microscopy in cytotechnology educational programs in the United States
Maheswari S Mukherjee, Amber D Donnelly, Vincent J DeAgano, Elizabeth R Lyden, Stanley J Radio
J Pathol Inform 2016, 7:8 (1 March 2016)
DOI:10.4103/2153-3539.177682  PMID:27076986
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Technical Note: Implementation of Epic Beaker Clinical Pathology at an academic medical center Highly accessed article
Matthew D Krasowski, Joseph D Wilford, Wanita Howard, Susan K Dane, Scott R Davis, Nitin J Karandikar, John L Blau, Bradley A Ford
J Pathol Inform 2016, 7:7 (5 February 2016)
DOI:10.4103/2153-3539.175798  PMID:26955505
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Review Article: Data security in genomics: A review of Australian privacy requirements and their relation to cryptography in data storage
Arran Schlosberg
J Pathol Inform 2016, 7:6 (5 February 2016)
DOI:10.4103/2153-3539.175793  PMID:26955504
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Research Article: Feature-based analysis of mouse prostatic intraepithelial neoplasia in histological tissue sections
Pekka Ruusuvuori, Mira Valkonen, Matti Nykter, Tapio Visakorpi, Leena Latonen
J Pathol Inform 2016, 7:5 (29 January 2016)
DOI:10.4103/2153-3539.175378  PMID:26955503
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Original Article: Diagnostic time in digital pathology: A comparative study on 400 cases
Aleksandar Vodovnik
J Pathol Inform 2016, 7:4 (29 January 2016)
DOI:10.4103/2153-3539.175377  PMID:26955502
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Technical Note: Oxygen supply maps for hypoxic microenvironment visualization in prostate cancer
Niels J Rupp, Peter J Schuffler, Qing Zhong, Florian Falkner, Markus Rechsteiner, Jan H Ruschoff, Christian Fankhauser, Matthias Drach, Remo Largo, Mathias Tremp, Cedric Poyet, Tullio Sulser, Glen Kristiansen, Holger Moch, Joachim Buhmann, Michael Muntener, Peter J Wild
J Pathol Inform 2016, 7:3 (29 January 2016)
DOI:10.4103/2153-3539.175376  PMID:26955501
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Editorial: How can we improve Science, Technology, Engineering, and Math education to encourage careers in Biomedical and Pathology Informatics?
Rahul Uppal, Gunasheil Mandava, Katrina M Romagnoli, Andrew J King, Amie J Draper, Adam L Handen, Arielle M Fisher, Michael J Becich, Joyeeta Dutta-Moscato
J Pathol Inform 2016, 7:2 (29 January 2016)
DOI:10.4103/2153-3539.175375  PMID:26955500
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Research Article: Quantitative nucleic features are effective for discrimination of intraductal proliferative lesions of the breast
Masatoshi Yamada, Akira Saito, Yoichiro Yamamoto, Eric Cosatto, Atsushi Kurata, Toshitaka Nagao, Ayako Tateishi, Masahiko Kuroda
J Pathol Inform 2016, 7:1 (29 January 2016)
DOI:10.4103/2153-3539.175380  PMID:26955499
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Original Article: International telepathology consultation: Three years of experience between the University of Pittsburgh Medical Center and KingMed Diagnostics in China
Chengquan Zhao, Tao Wu, Xiangdong Ding, Anil V Parwani, Hualin Chen, Jeffrey McHugh, Anthony Piccoli, Qinling Xie, Gonzalo Romero Lauro, Xiaodong Feng, Douglas J Hartman, Raja R Seethala, Shangwei Wu, Samuel Yousem, Yaoming Liang, Liron Pantanowitz
J Pathol Inform 2015, 6:63 (27 November 2015)
DOI:10.4103/2153-3539.170650  PMID:26730353
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Technical Note: Extraction and analysis of discrete synoptic pathology report data using R
Alexander Boag
J Pathol Inform 2015, 6:62 (27 November 2015)
DOI:10.4103/2153-3539.170649  PMID:26730352
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Technical Note: General pathologist-helper: The new medical app about general pathology
Iván Fernandez-Vega
J Pathol Inform 2015, 6:61 (27 November 2015)
DOI:10.4103/2153-3539.170648  PMID:26730351
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Original Article: Prediction of primary breast cancer size and T-stage using micro-computed tomography in lumpectomy specimens
Wafa M Sarraj, Rong Tang, Anas L Najjar, Molly Griffin, Anthony H Bui, Alan Zambeli-Ljepovic, Mike Senter-Zapata, Maya Lewin-Berlin, Leopoldo Fernandez, Juliette Buckley, Amy Ly, Elena Brachtel, Owen Aftreth, John Gilbertson, Yukako Yagi, Michele Gadd, Kevin S Hughes, Barbara L Smith, James S Michaelson
J Pathol Inform 2015, 6:60 (27 November 2015)
DOI:10.4103/2153-3539.170647  PMID:26730350
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Research Article: Inclusion probability for DNA mixtures is a subjective one-sided match statistic unrelated to identification information Highly accessed article
Mark William Perlin
J Pathol Inform 2015, 6:59 (28 October 2015)
DOI:10.4103/2153-3539.168525  
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Letter to Editor: Response to Rojo and Bueno: "Analysis of the impact of high resolution monitors in digital pathology"
Rebecca Randell, Roy A Ruddle, Rhys G Thomas, Darren Treanor
J Pathol Inform 2015, 6:58 (28 October 2015)
DOI:10.4103/2153-3539.168522  
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Commentary: Analysis of the impact of high-resolution monitors in digital pathology
Marcial García Rojo, Gloria Bueno
J Pathol Inform 2015, 6:57 (28 October 2015)
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Research Article: Diagnostic performance on briefly presented digital pathology images
Joseph P Houghton, Bruce R Smoller, Niamh Leonard, Michael R Stevenson, Tim Dornan
J Pathol Inform 2015, 6:56 (28 October 2015)
DOI:10.4103/2153-3539.168517  
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Research Article: Utility of telepathology as a consultation tool between an off-site surgical pathology suite and affiliated hospitals in the frozen section diagnosis of lung neoplasms
Taisia Vitkovski, Tawfiqul Bhuiya, Michael Esposito
J Pathol Inform 2015, 6:55 (28 October 2015)
DOI:10.4103/2153-3539.168515  
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Technical Note: Cytopathology whole slide images and virtual microscopy adaptive tutorials: A software pilot
Simone L Van Es, Wendy M Pryor, Zack Belinson, Elizabeth L Salisbury, Gary M Velan
J Pathol Inform 2015, 6:54 (28 September 2015)
DOI:10.4103/2153-3539.166016  
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Original Article: Rapid evaluation of fresh ex vivo kidney tissue with full-field optical coherence tomography
Manu Jain, Brian D Robinson, Bekheit Salamoon, Olivier Thouvenin, Claude Boccara, Sushmita Mukherjee
J Pathol Inform 2015, 6:53 (28 September 2015)
DOI:10.4103/2153-3539.166014  
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Research Article: Working toward consensus among professionals in the identification of classical cervical cytomorphological characteristics in whole slide images
Odille Bongaerts, Paul J van Diest, Math Pieters, Marius Nap
J Pathol Inform 2015, 6:52 (28 September 2015)
DOI:10.4103/2153-3539.166013  
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Research Article: Support patient search on pathology reports with interactive online learning based data extraction
Shuai Zheng, James J Lu, Christina Appin, Daniel Brat, Fusheng Wang
J Pathol Inform 2015, 6:51 (28 September 2015)
DOI:10.4103/2153-3539.166012  
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Research Article: Practical considerations in genomic decision support: The eMERGE experience
Timothy M Herr, Suzette J Bielinski, Erwin Bottinger, Ariel Brautbar, Murray Brilliant, Christopher G Chute, Beth L Cobb, Joshua C Denny, Hakon Hakonarson, Andrea L Hartzler, George Hripcsak, Joseph Kannry, Isaac S Kohane, Iftikhar J Kullo, Simon Lin, Shannon Manzi, Keith Marsolo, Casey Lynnette Overby, Jyotishman Pathak, Peggy Peissig, Jill Pulley, James Ralston, Luke Rasmussen, Dan M Roden, Gerard Tromp, Timothy Uphoff, Chunhua Weng, Wendy Wolf, Marc S Williams, Justin Starren
J Pathol Inform 2015, 6:50 (28 September 2015)
DOI:10.4103/2153-3539.165999  
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Original Article: Validation of whole slide imaging for frozen section diagnosis in surgical pathology
Thomas W Bauer, Renee J Slaw, Jesse K McKenney, Deepa T Patil
J Pathol Inform 2015, 6:49 (31 August 2015)
DOI:10.4103/2153-3539.163988  
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Technical Note: TissueCypher: A systems biology approach to anatomic pathology Highly accessed article
Jeffrey W Prichard, Jon M Davison, Bruce B Campbell, Kathleen A Repa, Lia M Reese, Xuan M Nguyen, Jinhong Li, Tyler Foxwell, Lansing D Taylor, Rebecca J Critchley-Thorne
J Pathol Inform 2015, 6:48 (31 August 2015)
DOI:10.4103/2153-3539.163987  
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Original Article: Whole slide image with image analysis of atypical bile duct brushing: Quantitative features predictive of malignancy
Brian T Collins, Cody R Weimholt
J Pathol Inform 2015, 6:47 (31 August 2015)
DOI:10.4103/2153-3539.163986  
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Viewpoint: A conceptual model for translating omic data into clinical action
Timothy M Herr, Suzette J Bielinski, Erwin Bottinger, Ariel Brautbar, Murray Brilliant, Christopher G Chute, Joshua Denny, Robert R Freimuth, Andrea Hartzler, Joseph Kannry, Isaac S Kohane, Iftikhar J Kullo, Simon Lin, Jyotishman Pathak, Peggy Peissig, Jill Pulley, James Ralston, Luke Rasmussen, Dan Roden, Gerard Tromp, Marc S Williams, Justin Starren
J Pathol Inform 2015, 6:46 (31 August 2015)
DOI:10.4103/2153-3539.163985  
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Technical Note: Use of a data warehouse at an academic medical center for clinical pathology quality improvement, education, and research Highly accessed article
Matthew D Krasowski, Andy Schriever, Gagan Mathur, John L Blau, Stephanie L Stauffer, Bradley A Ford
J Pathol Inform 2015, 6:45 (28 July 2015)
DOI:10.4103/2153-3539.161615  PMID:26284156
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Technical Note: Smartphone applications: A contemporary resource for dermatopathology
Matthew G Hanna, Anil V Parwani, Liron Pantanowitz, Vinod Punjabi, Rajendra Singh
J Pathol Inform 2015, 6:44 (28 July 2015)
DOI:10.4103/2153-3539.161612  PMID:26284155
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Original Article: Investigation of scanning parameters for thyroid fine needle aspiration cytology specimens: A pilot study
Maheswari S Mukherjee, Amber D Donnelly, Elizabeth R Lyden, Whitney R Wedel, Mary F McGaughey, John J Baker, Stanley J Radio
J Pathol Inform 2015, 6:43 (28 July 2015)
DOI:10.4103/2153-3539.161610  PMID:26284154
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