Journal of Pathology Informatics Journal of Pathology Informatics
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Technical Note: Use of a data warehouse at an academic medical center for clinical pathology quality improvement, education, and research
Matthew D Krasowski, Andy Schriever, Gagan Mathur, John L Blau, Stephanie L Stauffer, Bradley A Ford
J Pathol Inform 2015, 6:45 (28 July 2015)
DOI:10.4103/2153-3539.161615  
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Technical Note: Smartphone applications: A contemporary resource for dermatopathology
Matthew G Hanna, Anil V Parwani, Liron Pantanowitz, Vinod Punjabi, Rajendra Singh
J Pathol Inform 2015, 6:44 (28 July 2015)
DOI:10.4103/2153-3539.161612  
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Original Article: Investigation of scanning parameters for thyroid fine needle aspiration cytology specimens: A pilot study
Maheswari S Mukherjee, Amber D Donnelly, Elizabeth R Lyden, Whitney R Wedel, Mary F McGaughey, John J Baker, Stanley J Radio
J Pathol Inform 2015, 6:43 (28 July 2015)
DOI:10.4103/2153-3539.161610  
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Commentary: Environmental components and methods for engaging pathology residents in informatics training
Christopher A Garcia, Jason M Baron, Bruce A Beckwith, Victor Brodsky, Anand S Dighe, Thomas M Gudewicz, Ji Yeon Kim, Veronica E Klepeis, William J Lane, Roy E Lee, Bruce P Levy, Michael A Mahowald, Diana Mandelker, David S McClintock, Andrew M Quinn, Luigi K Rao, Gregory M Riedlinger, Joseph Rudolf, John R Gilbertson
J Pathol Inform 2015, 6:42 (29 June 2015)
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Original Article: Content-based image retrieval of digitized histopathology in boosted spectrally embedded spaces
Akshay Sridhar, Scott Doyle, Anant Madabhushi
J Pathol Inform 2015, 6:41 (29 June 2015)
DOI:10.4103/2153-3539.159441  
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Original Article: Development of a semi-automated method for subspecialty case distribution and prediction of intraoperative consultations in surgical pathology
Raul S Gonzalez, Daniel Long, Omar Hameed
J Pathol Inform 2015, 6:40 (29 June 2015)
DOI:10.4103/2153-3539.159439  
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Research Article: Automated image based prominent nucleoli detection
Choon K Yap, Emarene M Kalaw, Malay Singh, Kian T Chong, Danilo M Giron, Chao-Hui Huang, Li Cheng, Yan N Law, Hwee Kuan Lee
J Pathol Inform 2015, 6:39 (23 June 2015)
DOI:10.4103/2153-3539.159232  
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Research Article: Validation of natural language processing to extract breast cancer pathology procedures and results
Arika E Wieneke, Erin J. A. Bowles, David Cronkite, Karen J Wernli, Hongyuan Gao, David Carrell, Diana S. M. Buist
J Pathol Inform 2015, 6:38 (23 June 2015)
DOI:10.4103/2153-3539.159215  
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Original Article: Biomedical imaging ontologies: A survey and proposal for future work
Barry Smith, Sivaram Arabandi, Mathias Brochhausen, Michael Calhoun, Paolo Ciccarese, Scott Doyle, Bernard Gibaud, Ilya Goldberg, Charles E Kahn, James Overton, John Tomaszewski, Metin Gurcan
J Pathol Inform 2015, 6:37 (23 June 2015)
DOI:10.4103/2153-3539.159214  
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Technical Note: HPASubC: A suite of tools for user subclassification of human protein atlas tissue images
Toby C Cornish, Aravinda Chakravarti, Ashish Kapoor, Marc K Halushka
J Pathol Inform 2015, 6:36 (23 June 2015)
DOI:10.4103/2153-3539.159213  
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Research Article: Evaluation of a smartphone for telepathology: Lessons learned
Paul Fontelo, Fang Liu, Yukako Yagi
J Pathol Inform 2015, 6:35 (23 June 2015)
DOI:10.4103/2153-3539.158912  
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Original Article: Support system for pathologists and researchers
Takumi Ishikawa, Junko Takahashi, Mai Kasai, Takayuki Shiina, Yuka Iijima, Hiroshi Takemura, Hiroshi Mizoguchi, Takeshi Kuwata
J Pathol Inform 2015, 6:34 (23 June 2015)
DOI:10.4103/2153-3539.158911  
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Research Article: An optimized color transformation for the analysis of digital images of hematoxylin & eosin stained slides
Mark D Zarella, David E Breen, Andrei Plagov, Fernando U Garcia
J Pathol Inform 2015, 6:33 (23 June 2015)
DOI:10.4103/2153-3539.158910  
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Original Article: The need for informatics to support forensic pathology and death investigation
Bruce Levy
J Pathol Inform 2015, 6:32 (23 June 2015)
DOI:10.4103/2153-3539.158907  
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Symposium – International Academy of Digital Pathology (IADP): Comparative study between quantitative digital image analysis and fluorescence in situ hybridization of breast cancer equivocal human epidermal growth factor receptors 2 score 2 + cases
Essam Ayad, Mina Mansy, Dalal Elwi, Mostafa Salem, Mohamed Salama, Klaus Kayser
J Pathol Inform 2015, 6:31 (3 June 2015)
DOI:10.4103/2153-3539.158066  
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Symposium – International Academy of Digital Pathology (IADP): The use of virtual microscopy and a wiki in pathology education: Tracking student use, involvement, and response
Zev Leifer
J Pathol Inform 2015, 6:30 (3 June 2015)
DOI:10.4103/2153-3539.158063  
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Symposium – International Academy of Digital Pathology (IADP): A perspective on digital and computational pathology
Bhagavathi Ramamurthy, Frederick D Coffman, Stanley Cohen
J Pathol Inform 2015, 6:29 (3 June 2015)
DOI:10.4103/2153-3539.158059  
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Symposium – International Academy of Digital Pathology (IADP): Exploring viewing behavior data from whole slide images to predict correctness of students' answers during practical exams in oral pathology
Slawomir Walkowski, Mikael Lundin, Janusz Szymas, Johan Lundin
J Pathol Inform 2015, 6:28 (3 June 2015)
DOI:10.4103/2153-3539.158057  
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Symposium – International Academy of Digital Pathology (IADP): Understanding the three-dimensional world from two-dimensional immunofluorescent adjacent sections
Sho Fujisawa, Dmitry Yarilin, Ning Fan, Mesruh Turkekul, Ke Xu, Afsar Barlas, Katia Manova-Todorova
J Pathol Inform 2015, 6:27 (3 June 2015)
DOI:10.4103/2153-3539.158052  
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Symposium – International Academy of Digital Pathology (IADP): Enhancing automatic classification of hepatocellular carcinoma images through image masking, tissue changes and trabecular features
Maulana Abdul Aziz, Hiroshi Kanazawa, Yuri Murakami, Fumikazu Kimura, Masahiro Yamaguchi, Tomoharu Kiyuna, Yoshiko Yamashita, Akira Saito, Masahiro Ishikawa, Naoki Kobayashi, Tokiya Abe, Akinori Hashiguchi, Michiie Sakamoto
J Pathol Inform 2015, 6:26 (3 June 2015)
DOI:10.4103/2153-3539.158044  
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Symposium – International Academy of Digital Pathology (IADP): Reimagining the microscope in the 21 st century using the scalable adaptive graphics environment
Victor Mateevitsi, Tushar Patel, Jason Leigh, Bruce Levy
J Pathol Inform 2015, 6:25 (3 June 2015)
DOI:10.4103/2153-3539.158042  
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Abstract: Abstracts: Pathology Informatics 2015

J Pathol Inform 2015, 6:24 (2 June 2015)
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Review Article: A review of the current state of digital plate reading of cultures in clinical microbiology
Daniel D Rhoads, Susan M Novak, Liron Pantanowitz
J Pathol Inform 2015, 6:23 (28 May 2015)
DOI:10.4103/2153-3539.157789  
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Original Article: Whole slide imaging for human epidermal growth factor receptor 2 immunohistochemistry interpretation: Accuracy, Precision, and reproducibility studies for digital manual and paired glass slide manual interpretation
David C Wilbur, Elena F Brachtel, John R Gilbertson, Nicholas C Jones, John G Vallone, Savitra Krishnamurthy
J Pathol Inform 2015, 6:22 (28 May 2015)
DOI:10.4103/2153-3539.157788  
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Original Article: Prospector: A web-based tool for rapid acquisition of gold standard data for pathology research and image analysis
Alexander I Wright, Derek R Magee, Philip Quirke, Darren E Treanor
J Pathol Inform 2015, 6:21 (28 May 2015)
DOI:10.4103/2153-3539.157785  
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Original Article: Automated morphometry provides accurate and reproducible virtual staging of liver fibrosis in chronic hepatitis C
Paul Calès, Julien Chaigneau, Gilles Hunault, Sophie Michalak, Christine Cavaro-Menard, Jean-Baptiste Fasquel, Sandrine Bertrais, Marie-Christine Rousselet
J Pathol Inform 2015, 6:20 (28 May 2015)
DOI:10.4103/2153-3539.157782  
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Original Article: Rapid on-site evaluation with dynamic telecytopathology for ultrasound-guided fine-needle aspiration of head and neck nonthyroid lesions
Kamal K Khurana, Weisheng Xu, Dongliang Wang, Amar Swarnkar
J Pathol Inform 2015, 6:19 (28 May 2015)
DOI:10.4103/2153-3539.157781  
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Original Article: Distance reporting in digital pathology: A study on 950 cases
Aleksandar Vodovnik
J Pathol Inform 2015, 6:18 (30 April 2015)
DOI:10.4103/2153-3539.156168  
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Technical Note: Imaging file management to support international telepathology
Liron Pantanowitz, Jeffrey McHugh, William Cable, Chengquan Zhao, Anil V Parwani
J Pathol Inform 2015, 6:17 (24 March 2015)
DOI:10.4103/2153-3539.153917  PMID:25838969
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Research Article: Default settings of computerized physician order entry system order sets drive ordering habits
Jordan Olson, Christopher Hollenbeak, Keri Donaldson, Thomas Abendroth, William Castellani
J Pathol Inform 2015, 6:16 (24 March 2015)
DOI:10.4103/2153-3539.153916  PMID:25838968
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Research Article: Automated discrimination of lower and higher grade gliomas based on histopathological image analysis
Hojjat Seyed Mousavi, Vishal Monga, Ganesh Rao, Arvind U. K. Rao
J Pathol Inform 2015, 6:15 (24 March 2015)
DOI:10.4103/2153-3539.153914  PMID:25838967
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Commentary: Telecytopathology facilitates the use of rapid on-site evaluation in endoscopic ultraound fine needle aspiration of the pancreas to improve patient outcomes
Brian T Collins
J Pathol Inform 2015, 6:14 (24 March 2015)
PMID:25838966
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Editorial: 2014 American Telemedicine Association clinical guidelines for telepathology: Another important step in support of increased adoption of telepathology for patient care
Andrew J Evans, Elizabeth A Krupinski, Ronald S Weinstein, Liron Pantanowitz
J Pathol Inform 2015, 6:13 (24 March 2015)
DOI:10.4103/2153-3539.153906  PMID:25838965
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Book Review: Review of "digital pathology" by Yves Sucaet and Wim Waelput
John H Sinard
J Pathol Inform 2015, 6:12 (24 February 2015)
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Original Article: Performance of the CellaVision ® DM96 system for detecting red blood cell morphologic abnormalities
Christopher L Horn, Adnan Mansoor, Brenda Wood, Heather Nelson, Diane Higa, Lik Hang Lee, Christopher Naugler
J Pathol Inform 2015, 6:11 (24 February 2015)
DOI:10.4103/2153-3539.151922  PMID:25774322
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Original Article: A bayesian approach to laboratory utilization management
Ronald G Hauser, Brian R Jackson, Brian H Shirts
J Pathol Inform 2015, 6:10 (24 February 2015)
DOI:10.4103/2153-3539.151921  PMID:25774321
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Original Article: Clinical laboratory analytics: Challenges and promise for an emerging discipline
Brian H Shirts, Brian R Jackson, Geoffrey S Baird, Jason M Baron, Bryan Clements, Ricky Grisson, Ronald George Hauser, Julie R Taylor, Enrique Terrazas, Brad Brimhall
J Pathol Inform 2015, 6:9 (24 February 2015)
DOI:10.4103/2153-3539.151919  PMID:25774320
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Symposium - 2nd Nordic Symposium on Digital Pathology: RandomSpot: A web-based tool for systematic random sampling of virtual slides
Alexander I Wright, Heike I Grabsch, Darren E Treanor
J Pathol Inform 2015, 6:8 (24 February 2015)
DOI:10.4103/2153-3539.151906  PMID:25774319
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Symposium - 2nd Nordic Symposium on Digital Pathology: A comparative study of input devices for digital slide navigation
Jesper Molin, Claes Lundström, Morten Fjeld
J Pathol Inform 2015, 6:7 (24 February 2015)
DOI:10.4103/2153-3539.151894  PMID:25774318
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Symposium - 2nd Nordic Symposium on Digital Pathology: Histopathology in 3D: From three-dimensional reconstruction to multi-stain and multi-modal analysis
Derek Magee, Yi Song, Stephen Gilbert, Nicholas Roberts, Nagitha Wijayathunga, Ruth Wilcox, Andrew Bulpitt, Darren Treanor
J Pathol Inform 2015, 6:6 (24 February 2015)
DOI:10.4103/2153-3539.151890  PMID:25774317
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Symposium - 2nd Nordic Symposium on Digital Pathology: Summary of 2 nd Nordic symposium on digital pathology
Claes Lundström, Sten Thorstenson, Marie Waltersson, Anders Persson, Darren Treanor
J Pathol Inform 2015, 6:5 (24 February 2015)
DOI:10.4103/2153-3539.151889  PMID:25774316
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Commentary: Evaluating whole slide imaging: A working group opportunity
Darren Treanor, Brandon D Gallas, Marios A Gavrielides, Stephen M Hewitt
J Pathol Inform 2015, 6:4 (24 February 2015)
PMID:25774315
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Technical Note: Reqscan: An open source solution for laboratory requisition scanning, archiving and retrieval
Eviatar Bach, Daniel T Holmes
J Pathol Inform 2015, 6:3 (29 January 2015)
DOI:10.4103/2153-3539.150256  PMID:25722943
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Technical Note: Development and validation of an app-based cell counter for use in the clinical laboratory setting
Alexander C Thurman, Jessica L Davis, Max Jan, Charles E McCulloch, Benjamin D Buelow
J Pathol Inform 2015, 6:2 (29 January 2015)
DOI:10.4103/2153-3539.150252  PMID:25722942
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Research Article: Virtual microscopy in the undergraduate teaching of pathology
Oriol Ordi, Josep Antoni Bombí, Antonio Martínez, Josep Ramírez, Llúcia Alòs, Adela Saco, Teresa Ribalta, Pedro L Fernández, Elias Campo, Jaume Ordi
J Pathol Inform 2015, 6:1 (29 January 2015)
DOI:10.4103/2153-3539.150246  PMID:25722941
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View Point: 21 st century workflow: A proposal Highly accessed article
Jeffrey L Fine
J Pathol Inform 2014, 5:44 (28 November 2014)
DOI:10.4103/2153-3539.145733  PMID:25535592
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Technical Note: Validation of a whole slide imaging system for primary diagnosis in surgical pathology: A community hospital experience
Thomas P Buck, Rebecca Dilorio, Lauren Havrilla, Dennis G O'Neill
J Pathol Inform 2014, 5:43 (28 November 2014)
DOI:10.4103/2153-3539.145731  PMID:25535591
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Book Review: Review of Biomedical Informatics Highly accessed article
Raymond D Aller
J Pathol Inform 2014, 5:42 (21 October 2014)
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Research Article: Web-based oil immersion whole slide imaging increases efficiency and clinical team satisfaction in hematopathology tumor board
Zhongchuan Will Chen, Jessica Kohan, Sherrie L Perkins, Jerry W Hussong, Mohamed E Salama
J Pathol Inform 2014, 5:41 (21 October 2014)
DOI:10.4103/2153-3539.143336  PMID:25379347
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Research Article: A nuclear circularity-based classifier for diagnostic distinction of desmoplastic from spindle cell melanoma in digitized histological images
Manuel Schöchlin, Stephanie E Weissinger, Arnd R Brandes, Markus Herrmann, Peter Möller, Jochen K Lennerz
J Pathol Inform 2014, 5:40 (21 October 2014)
DOI:10.4103/2153-3539.143335  PMID:25379346
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Guidelines: American Telemedicine Association clinical guidelines for telepathology
Liron Pantanowitz, Kim Dickinson, Andrew J Evans, Lewis A Hassell, Walter H Henricks, Jochen K Lennerz, Amanda Lowe, Anil V Parwani, Michael Riben, Daniel Smith, J Mark Tuthill, Ronald S Weinstein, David C Wilbur, Elizabeth A Krupinski, Jordana Bernard
J Pathol Inform 2014, 5:39 (21 October 2014)
DOI:10.4103/2153-3539.143329  PMID:25379345
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Editorial: Regulatory barriers surrounding the use of whole slide imaging in the United States of America Highly accessed article
Anil V Parwani, Lewis Hassell, Eric Glassy, Liron Pantanowitz
J Pathol Inform 2014, 5:38 (21 October 2014)
DOI:10.4103/2153-3539.143325  PMID:25379344
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Original Article: Can automated alerts within computerized physician order entry improve compliance with laboratory practice guidelines for ordering Pap tests?
Lydia Pleotis Howell, Scott MacDonald, Jacqueline Jones, Daniel J Tancredi, Joy Melnikow
J Pathol Inform 2014, 5:37 (30 September 2014)
DOI:10.4103/2153-3539.141994  PMID:25337434
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Technical Note: Streamlined sign-out of capillary protein electrophoresis using middleware and an open-source macro application
Gagan Mathur, Thomas H Haugen, Scott L Davis, Matthew D Krasowski
J Pathol Inform 2014, 5:36 (30 September 2014)
DOI:10.4103/2153-3539.141990  PMID:25337433
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Research Article: Novel web-based real-time dashboard to optimize recycling and use of red cell units at a large multi-site transfusion service Highly accessed article
Christopher Sharpe, Jason G Quinn, Stephanie Watson, Donald Doiron, Bryan Crocker, Calvino Cheng
J Pathol Inform 2014, 5:35 (30 September 2014)
DOI:10.4103/2153-3539.141989  PMID:25337432
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Research Article: Web-based pathology practice examination usage
Edward C Klatt
J Pathol Inform 2014, 5:34 (30 September 2014)
DOI:10.4103/2153-3539.141987  PMID:25337431
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Research Article: Can digital pathology result in cost savings? A financial projection for digital pathology implementation at a large integrated health care organization Highly accessed article
Jonhan Ho, Stefan M Ahlers, Curtis Stratman, Orly Aridor, Liron Pantanowitz, Jeffrey L Fine, John A Kuzmishin, Michael C Montalto, Anil V Parwani
J Pathol Inform 2014, 5:33 (28 August 2014)
DOI:10.4103/2153-3539.139714  PMID:25250191
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Symposium: Carnegie Mellon University bioimaging day 2014: Challenges and opportunities in digital pathology
Gustavo K Rohde, John A Ozolek, Anil V Parwani, Liron Pantanowitz
J Pathol Inform 2014, 5:32 (28 August 2014)
DOI:10.4103/2153-3539.139712  PMID:25250190
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Editorial: Journal of Pathology Informatics thanks its reviewers
Liron Pantanowitz, Anil V Parwani
J Pathol Inform 2014, 5:31 (28 August 2014)
DOI:10.4103/2153-3539.139711  PMID:25250189
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Editorial: American Telemedicine Association 2014 meeting: What did you miss?
Liron Pantanowitz, Elizabeth A Krupinski
J Pathol Inform 2014, 5:30 (28 August 2014)
DOI:10.4103/2153-3539.139710  PMID:25250188
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Technical Note: Development and implementation of a custom integrated database with dashboards to assist with hematopathology specimen triage and traffic Highly accessed article
Elizabeth M Azzato, Jennifer J D Morrissette, Regina D Halbiger, Adam Bagg, Robert D Daber
J Pathol Inform 2014, 5:29 (28 August 2014)
DOI:10.4103/2153-3539.139709  PMID:25250187
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Research Article: Automated quantification of aligned collagen for human breast carcinoma prognosis Highly accessed article
Jeremy S Bredfeldt, Yuming Liu, Matthew W Conklin, Patricia J Keely, Thomas R Mackie, Kevin W Eliceiri
J Pathol Inform 2014, 5:28 (28 August 2014)
DOI:10.4103/2153-3539.139707  PMID:25250186
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