Journal of Pathology Informatics Journal of Pathology Informatics
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Research Article: A digital pathology-based shotgun-proteomics approach to biomarker discovery in colorectal cancer
Stefan Zahnd, Sophie Braga-Lagache, Natasha Buchs, Alessandro Lugli, Heather Dawson, Manfred Heller, Inti Zlobec
J Pathol Inform 2019, 10:40 (12 December 2019)
DOI:10.4103/jpi.jpi_65_18  
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Research Article: Whole-slide image focus quality: Automatic assessment and impact on ai cancer detection
Timo Kohlberger, Yun Liu, Melissa Moran, Po-Hsuan Cameron Chen, Trissia Brown, Jason D Hipp, Craig H Mermel, Martin C Stumpe
J Pathol Inform 2019, 10:39 (12 December 2019)
DOI:10.4103/jpi.jpi_11_19  
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Commentary: Clinical-grade Computational Pathology: Alea Iacta Est
Filippo Fraggetta
J Pathol Inform 2019, 10:38 (11 December 2019)
DOI:10.4103/jpi.jpi_54_19  
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Original Article: On the edge of a digital pathology transformation: Views from a cellular pathology laboratory focus group
Casmir Turnquist, Sharon Roberts-Gant, Helen Hemsworth, Kieron White, Lisa Browning, Gabrielle Rees, Derek Roskell, Clare Verrill
J Pathol Inform 2019, 10:37 (2 December 2019)
DOI:10.4103/jpi.jpi_38_19  
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Original Article: Order Indication Solicitation to Assess Clinical Laboratory Test Utilization: D-Dimer Order Patterns as an Illustrative Case
Joseph W Rudolf, Jason M Baron, Anand S Dighe
J Pathol Inform 2019, 10:36 (2 December 2019)
DOI:10.4103/jpi.jpi_46_19  
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Review Article: Role of Telemedicine in Multidisciplinary Team Meetings
Mohammad Reza F. Aghdam, Aleksandar Vodovnik, Rania Adel Hameed
J Pathol Inform 2019, 10:35 (18 November 2019)
DOI:10.4103/jpi.jpi_20_19  
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Original Article: Diagnosis of pancreatic cystic lesions by virtual slicing: Comparison of diagnostic potential of needle-based confocal laser endomicroscopy versus endoscopic ultrasound-guided fine-needle aspiration
Mehrvash Haghighi, Amrita Sethi, Iman Tavassoly, Tamas A Gonda, John M Poneros, Russell B McBride
J Pathol Inform 2019, 10:34 (13 November 2019)
DOI:10.4103/jpi.jpi_32_19  
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Original Article: A taxonomic index for retrieval of digitized whole slide images from an electronic database for medical school and pathology residency education
Agnes G Loeffler, Mark Smith, Elizabeth Way, Michelle Stoffel, Daniel F I Kurtycz
J Pathol Inform 2019, 10:33 (12 November 2019)
DOI:10.4103/jpi.jpi_34_19  
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ABSTRACTS: 14th European congress on digital pathology

J Pathol Inform 2019, 10:32 (11 November 2019)
DOI:10.4103/2153-3539.270744  
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Original Article: The California Telepathology Service: UCLA's experience in deploying a regional digital pathology subspecialty consultation network
Thomas Chong, M Fernando Palma-Diaz, Craig Fisher, Dorina Gui, Nora L Ostrzega, Geoffrey Sempa, Anthony E Sisk, Mark Valasek, Beverly Y Wang, Jonathan Zuckerman, Chris Khacherian, Scott Binder, W Dean Wallace
J Pathol Inform 2019, 10:31 (27 September 2019)
DOI:10.4103/jpi.jpi_22_19  PMID:31620310
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Research Article: Statistical analysis of survival models using feature quantification on prostate cancer histopathological images
Jian Ren, Eric A Singer, Evita Sadimin, David J Foran, Xin Qi
J Pathol Inform 2019, 10:30 (27 September 2019)
DOI:10.4103/jpi.jpi_85_18  PMID:31620309
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Original Article: Differentiating noninvasive follicular thyroid neoplasm with papillary-like nuclear features from classic papillary thyroid carcinoma: Analysis of cytomorphologic descriptions using a novel machine-learning approach
Sara Maleki, Amin Zandvakili, Shweta Gera, Seema D Khutti, Adam Gersten, Samer N Khader
J Pathol Inform 2019, 10:29 (18 September 2019)
DOI:10.4103/jpi.jpi_25_19  PMID:31579155
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Abstracts: Abstracts

J Pathol Inform 2019, 10:28 (16 September 2019)
DOI:10.4103/2153-3539.266902  
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Editorial: 2020 vision of digital pathology in action
Sylvia L Asa, Anna C Bodén, Darren Treanor, Sofia Jarkman, Claes Lundström, Liron Pantanowitz
J Pathol Inform 2019, 10:27 (14 August 2019)
DOI:10.4103/jpi.jpi_31_19  PMID:31516758
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Research Article: Development of a calculated panel reactive antibody web service with local frequencies for platelet transfusion refractoriness risk stratification
William J Gordon, Layne Ainsworth, Samuel Aronson, Jane Baronas, Richard M Kaufman, Indira Guleria, Edgar L Milford, Michael Oates, Rory Dela Paz, Melissa Y Yeung, William J Lane
J Pathol Inform 2019, 10:26 (1 August 2019)
DOI:10.4103/jpi.jpi_29_19  PMID:31463162
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Research Article: Process variation detection using missing data in a multihospital community practice anatomic pathology laboratory
Gretchen E Galliano
J Pathol Inform 2019, 10:25 (1 August 2019)
DOI:10.4103/jpi.jpi_18_19  PMID:31463161
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Research Article: Multi-field-of-view deep learning model predicts nonsmall cell lung cancer programmed death-ligand 1 status from whole-slide hematoxylin and eosin images
Lingdao Sha, Boleslaw L Osinski, Irvin Y Ho, Timothy L Tan, Caleb Willis, Hannah Weiss, Nike Beaubier, Brett M Mahon, Tim J Taxter, Stephen S F Yip
J Pathol Inform 2019, 10:24 (23 July 2019)
DOI:10.4103/jpi.jpi_24_19  PMID:31523482
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Commentary: Commentary: Guideline for Performing Human Epidermal Growth Factor Receptor 2 Immunohistochemistry Quantitative Image Analysis well
Bruce Beckwith
J Pathol Inform 2019, 10:23 (23 July 2019)
DOI:10.4103/jpi.jpi_19_19  PMID:31523481
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Research Article: Annotations, ontologies, and whole slide images – Development of an annotated ontology-driven whole slide image library of normal and abnormal human tissue
Karin Lindman, Jerómino F Rose, Martin Lindvall, Claes Lundstrom, Darren Treanor
J Pathol Inform 2019, 10:22 (23 July 2019)
DOI:10.4103/jpi.jpi_81_18  PMID:31523480
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Review Article: The landscape of digital pathology in transplantation: From the beginning to the virtual E-slide
Ilaria Girolami, Anil Parwani, Valeria Barresi, Stefano Marletta, Serena Ammendola, Lavinia Stefanizzi, Luca Novelli, Arrigo Capitanio, Matteo Brunelli, Liron Pantanowitz, Albino Eccher
J Pathol Inform 2019, 10:21 (1 July 2019)
DOI:10.4103/jpi.jpi_27_19  PMID:31367473
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Original Article: Computational algorithms that effectively reduce report defects in surgical pathology
Jay J Ye, Michael R Tan
J Pathol Inform 2019, 10:20 (1 July 2019)
DOI:10.4103/jpi.jpi_17_19  PMID:31367472
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Original Article: Deep learning-based retrieval system for gigapixel histopathology cases and the open access literature
Roger Schaer, Sebastian Otálora, Oscar Jimenez-del-Toro, Manfredo Atzori, Henning Müller
J Pathol Inform 2019, 10:19 (1 July 2019)
DOI:10.4103/jpi.jpi_88_18  PMID:31367471
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Research Article: Improving medical students' understanding of pediatric diseases through an innovative and tailored web-based digital pathology program with philips pathology Tutor (Formerly PathXL)
Cathy P Chen, Bradley M Clifford, Matthew J O'Leary, Douglas J Hartman, Jennifer L Picarsic
J Pathol Inform 2019, 10:18 (18 June 2019)
DOI:10.4103/jpi.jpi_15_19  PMID:31360593
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Commentary: And they said it couldn't be done: Predicting known driver mutations from H&E slides
Michael C Montalto, Robin Edwards
J Pathol Inform 2019, 10:17 (6 May 2019)
DOI:10.4103/jpi.jpi_91_18  PMID:31149368
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Research Article: Burden and characteristics of unsolicited emails from medical/scientific journals, conferences, and webinars to faculty and trainees at an academic pathology department
Matthew D Krasowski, Janna C Lawrence, Angela S Briggs, Bradley A Ford
J Pathol Inform 2019, 10:16 (6 May 2019)
DOI:10.4103/jpi.jpi_12_19  PMID:31149367
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Erratum: Erratum: Introduction to Digital Image Analysis in Whole-slide Imaging: A White Paper from the Digital Pathology Assoc

J Pathol Inform 2019, 10:15 (24 April 2019)
DOI:10.4103/2153-3539.259372  PMID:31198617
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Review Article: National Society for Histotechnology and digital pathology association online self-paced digital pathology certificate of completion program
Elizabeth A Chlipala, Traci DeGeer, Kathleen Dwyer, Shelley Ganske, David Krull, Haydee Lara, Lisa Manning, Dylan Steiner, Lisa Stephens, Diane Sterchi, Aubrey Wanner, Connie Wildeman, Liron Pantanowitz
J Pathol Inform 2019, 10:14 (3 April 2019)
DOI:10.4103/jpi.jpi_5_19  PMID:31057983
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Original Article: Construction and utilization of a neural network model to predict current procedural terminology codes from pathology report texts
Jay J Ye
J Pathol Inform 2019, 10:13 (3 April 2019)
DOI:10.4103/jpi.jpi_3_19  PMID:31057982
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Technical Note: Dual-Personality DICOM-TIFF for whole slide images: A migration technique for legacy software
David A Clunie
J Pathol Inform 2019, 10:12 (3 April 2019)
DOI:10.4103/jpi.jpi_93_18  PMID:31057981
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Research Article: Breast cancer prognostic factors in the digital era: Comparison of Nottingham grade using whole slide images and glass slides
Tara M Davidson, Mara H Rendi, Paul D Frederick, Tracy Onega, Kimberly H Allison, Ezgi Mercan, Tad T Brunyé, Linda G Shapiro, Donald L Weaver, Joann G Elmore
J Pathol Inform 2019, 10:11 (3 April 2019)
DOI:10.4103/jpi.jpi_29_18  PMID:31057980
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ABSTRACTS: Digital and Computational Pathology: Bring the Future into Focus

J Pathol Inform 2019, 10:10 (1 April 2019)
DOI:10.4103/2153-3539.255259  
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Review Article: Introduction to digital image analysis in whole-slide imaging: A white paper from the digital pathology association Highly accessed article
Famke Aeffner, Mark D Zarella, Nathan Buchbinder, Marilyn M Bui, Matthew R Goodman, Douglas J Hartman, Giovanni M Lujan, Mariam A Molani, Anil V Parwani, Kate Lillard, Oliver C Turner, Venkata N P Vemuri, Ana G Yuil-Valdes, Douglas Bowman
J Pathol Inform 2019, 10:9 (8 March 2019)
DOI:10.4103/jpi.jpi_82_18  PMID:30984469
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Research Article: Ki67 quantitative interpretation: Insights using image analysis
Zoya Volynskaya, Ozgur Mete, Sara Pakbaz, Doaa Al-Ghamdi, Sylvia L Asa
J Pathol Inform 2019, 10:8 (8 March 2019)
DOI:10.4103/jpi.jpi_76_18  PMID:30984468
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Original Research: Automated detection of celiac disease on duodenal biopsy slides: A deep learning approach
Jason W Wei, Jerry W Wei, Christopher R Jackson, Bing Ren, Arief A Suriawinata, Saeed Hassanpour
J Pathol Inform 2019, 10:7 (8 March 2019)
DOI:10.4103/jpi.jpi_87_18  PMID:30984467
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Research Article: Validation of whole-slide digitally imaged melanocytic lesions: Does z-stack scanning improve diagnostic accuracy?
Bart Sturm, David Creytens, Martin G Cook, Jan Smits, Marcory C. R. F. van Dijk, Erik Eijken, Eline Kurpershoek, Heidi V. N Küsters-Vandevelde, Ariadne H. A. G. Ooms, Carla Wauters, Willeke A. M. Blokx, Jeroen A. W. M. van der Laak
J Pathol Inform 2019, 10:6 (21 February 2019)
DOI:10.4103/jpi.jpi_46_18  PMID:30972225
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Research Article: Classification of melanocytic lesions in selected and whole-slide images via convolutional neural networks
Steven N Hart, William Flotte, Andrew P Norgan, Kabeer K Shah, Zachary R Buchan, Taofic Mounajjed, Thomas J Flotte
J Pathol Inform 2019, 10:5 (20 February 2019)
DOI:10.4103/jpi.jpi_32_18  PMID:30972224
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Original Article: Automated computational detection, quantitation, and mapping of mitosis in whole-slide images for clinically actionable surgical pathology decision support
Munish Puri, Shelley B Hoover, Stephen M Hewitt, Bih-Rong Wei, Hibret Amare Adissu, Charles H C Halsey, Jessica Beck, Charles Bradley, Sarah D Cramer, Amy C Durham, D Glen Esplin, Chad Frank, L Tiffany Lyle, Lawrence D McGill, Melissa D Sánchez, Paula A Schaffer, Ryan P Traslavina, Elizabeth Buza, Howard H Yang, Maxwell P Lee, Jennifer E Dwyer, R Mark Simpson
J Pathol Inform 2019, 10:4 (7 February 2019)
DOI:10.4103/jpi.jpi_59_18  PMID:30915258
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Technical Note: Development and implementation of real-time web-based dashboards in a multisite transfusion service
Jennifer S Woo, Peter Suslow, Russell Thorsen, Rosaline Ma, Sara Bakhtary, Morvarid Moayeri, Ashok Nambiar
J Pathol Inform 2019, 10:3 (7 February 2019)
DOI:10.4103/jpi.jpi_36_18  PMID:30915257
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Editorial: New European union regulations related to whole slide image scanners and image analysis software
Marcial Garcia-Rojo, David De Mena, Pedro Muriel-Cueto, Lidia Atienza-Cuevas, Manuel Dominguez-Gomez, Gloria Bueno
J Pathol Inform 2019, 10:2 (24 January 2019)
DOI:10.4103/jpi.jpi_33_18  PMID:30783546
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Review Article: Invention and early history of telepathology (1985-2000)
Ronald S Weinstein, Michael J Holcomb, Elizabeth A Krupinski
J Pathol Inform 2019, 10:1 (24 January 2019)
DOI:10.4103/jpi.jpi_71_18  PMID:30783545
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ABSTRACTS: Pathology Informatics Summit 2018

J Pathol Inform 2018, 9:50 (31 December 2018)
DOI:10.4103/2153-3539.249129  
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Research Article: A comprehensive study of telecytology using robotic digital microscope and single Z-stack digital scan for fine-needle aspiration-rapid on-site evaluation
Keluo Yao, Rulong Shen, Anil Parwani, Zaibo Li
J Pathol Inform 2018, 9:49 (24 December 2018)
DOI:10.4103/jpi.jpi_75_18  PMID:30662795
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Research Article: Super-resolution digital pathology image processing of bone marrow aspirate and cytology smears and tissue sections
Amol Singh, Robert S Ohgami
J Pathol Inform 2018, 9:48 (24 December 2018)
DOI:10.4103/jpi.jpi_56_18  PMID:30662794
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Technical Note: Integration of cancer registry data into the text information extraction system: Leveraging the structured data import tool
Faina Linkov, Jonathan C Silverstein, Michael Davis, Brenda Crocker, Degan Hao, Althea Schneider, Melissa Schwenk, Sharon Winters, Joyce Zelnis, Adrian V Lee, Michael J Becich
J Pathol Inform 2018, 9:47 (24 December 2018)
DOI:10.4103/jpi.jpi_38_18  PMID:30662793
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Original Article: The importance of eSlide macro images for primary diagnosis with whole slide imaging
Filippo Fraggetta, Yukako Yagi, Marcial Garcia-Rojo, Andrew J Evans, J Mark Tuthill, Alexi Baidoshvili, Douglas J Hartman, Junya Fukuoka, Liron Pantanowitz
J Pathol Inform 2018, 9:46 (24 December 2018)
DOI:10.4103/jpi.jpi_70_18  PMID:30662792
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Research Article: Computer-aided laser dissection: A microdissection workflow leveraging image analysis tools
Jason D Hipp, Donald J Johann, Yun Chen, Anant Madabhushi, James Monaco, Jerome Cheng, Jaime Rodriguez-Canales, Martin C Stumpe, Greg Riedlinger, Avi Z Rosenberg, Jeffrey C Hanson, Lakshmi P Kunju, Michael R Emmert-Buck, Ulysses J Balis, Michael A Tangrea
J Pathol Inform 2018, 9:45 (11 December 2018)
DOI:10.4103/jpi.jpi_60_18  PMID:30622835
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Original Article: Laboratory computer performance in a digital pathology environment: Outcomes from a single institution
Mark D Zarella, Adam Feldscher
J Pathol Inform 2018, 9:44 (11 December 2018)
DOI:10.4103/jpi.jpi_47_18  PMID:30622834
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Original Article: Artificial intelligence in cytopathology: A neural network to identify papillary carcinoma on thyroid fine-needle aspiration cytology smears
Parikshit Sanyal, Tanushri Mukherjee, Sanghita Barui, Avinash Das, Prabaha Gangopadhyay
J Pathol Inform 2018, 9:43 (3 December 2018)
DOI:10.4103/jpi.jpi_43_18  PMID:30607310
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Research Article: Interactive digital microscopy at the center for a cross-continent undergraduate pathology course in Mozambique
Leonor David, Isabel Martins, Mamudo Rafik Ismail, Fabíola Fernandes, Mohsin Sidat, Mário Seixas, Elsa Fonseca, Carla Carrilho
J Pathol Inform 2018, 9:42 (3 December 2018)
DOI:10.4103/jpi.jpi_63_18  PMID:30607309
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Original Article: Parathyroid frozen section interpretation via desktop telepathology systems: A validation study
Edward Chandraratnam, Leonardo D Santos, Shaun Chou, Jun Dai, Juan Luo, Syeda Liza, Ronald Y Chin
J Pathol Inform 2018, 9:41 (3 December 2018)
DOI:10.4103/jpi.jpi_57_18  PMID:30607308
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