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Automated quantification of aligned collagen for human breast carcinoma prognosis

Bredfeldt Jeremy S, Liu Yuming, Conklin Matthew W, Keely Patricia J, Mackie Thomas R, Eliceiri Kevin W

Year : 2014| Volume: 5| Issue : 1 | Page no: 28-28

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The American Journal of Pathology. 2018; 188(3): 559
[Pubmed]  [Google Scholar] [DOI]
2 Quantitative evaluation of redox ratio and collagen characteristics during breast cancer chemotherapy using two-photon intrinsic imaging
Shulian Wu,Yudian Huang,Qinggong Tang,Zhifang Li,Hannah Horng,Jiatian Li,Zaihua Wu,Yu Chen,Hui Li
Biomedical Optics Express. 2018; 9(3): 1375
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3 Quantization of collagen organization in the stroma with a new order coefficient
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[Pubmed]  [Google Scholar] [DOI]
4 Damage-induced reactive oxygen species regulate vimentin and dynamic collagen-based projections to mediate wound repair
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eLife. 2018; 7
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5 Quantification of Collagen Organization after Nerve Repair
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Plastic and Reconstructive Surgery - Global Open. 2017; 5(12): e1586
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6 Ovarian and Breast Cancer Migration Dynamics on Laminin and Fibronectin Bi-directional Gradient Fibers Fabricated via Multiphoton Excited Photochemistry
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7 Identification of prognostic collagen signatures and potential therapeutic stromal targets in canine mammary gland carcinoma
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[Pubmed]  [Google Scholar] [DOI]
8 Identifying progression predictors of breast ductal carcinoma in situ
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11 Fitting-free algorithm for efficient quantification of collagen fiber alignment in SHG imaging applications
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15 Elevated collagen-I augments tumor progressive signals, intravasation and metastasis of prolactin-induced estrogen receptor alpha positive mammary tumor cells
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[Pubmed]  [Google Scholar] [DOI]
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[Pubmed]  [Google Scholar] [DOI]
19 Local alignment vectors reveal cancer cell-induced ECM fiber remodeling dynamics
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Scientific Reports. 2017; 7: 39498
[Pubmed]  [Google Scholar] [DOI]
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Linan Liu,Shirley X. Zhang,Wenbin Liao,Henry P. Farhoodi,Chi W. Wong,Claire C. Chen,Aude I. Ségaliny,Jenu V. Chacko,Lily P. Nguyen,Mengrou Lu,George Polovin,Egest J. Pone,Timothy L. Downing,Devon A. Lawson,Michelle A. Digman,Weian Zhao
Science Translational Medicine. 2017; 9(400): eaan2966
[Pubmed]  [Google Scholar] [DOI]
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[Pubmed]  [Google Scholar] [DOI]
22 Mechanical Properties of the Tumor Stromal Microenvironment Probed In Vitro and Ex Vivo by In Situ-Calibrated Optical Trap-Based Active Microrheology
Jack R. Staunton,Wilfred Vieira,King Leung Fung,Ross Lake,Alexus Devine,Kandice Tanner
Cellular and Molecular Bioengineering. 2016; 9(3): 398
[Pubmed]  [Google Scholar] [DOI]
23 Raised mammographic density: causative mechanisms and biological consequences
Michael J. Sherratt,James C. McConnell,Charles H. Streuli
Breast Cancer Research. 2016; 18(1)
[Pubmed]  [Google Scholar] [DOI]
24 LKB1 kinase-dependent and -independent defects disrupt polarity and adhesion signaling to drive collagen remodeling during invasion
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Molecular Biology of the Cell. 2016; 27(7): 1069
[Pubmed]  [Google Scholar] [DOI]
25 Increased peri-ductal collagen micro-organization may contribute to raised mammographic density
James C. McConnell,Oliver V. O’Connell,Keith Brennan,Lisa Weiping,Miles Howe,Leena Joseph,David Knight,Ronan O’Cualain,Yit Lim,Angela Leek,Rachael Waddington,Jane Rogan,Susan M. Astley,Ashu Gandhi,Cliona C. Kirwan,Michael J. Sherratt,Charles H. Streuli
Breast Cancer Research. 2016; 18(1)
[Pubmed]  [Google Scholar] [DOI]
26 Comparison of Picrosirius Red Staining With Second Harmonic Generation Imaging for the Quantification of Clinically Relevant Collagen Fiber Features in Histopathology Samples
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Journal of Histochemistry & Cytochemistry. 2016; 64(9): 519
[Pubmed]  [Google Scholar] [DOI]
27 Radiation Promptly Alters Cancer Live Cell Metabolic Fluxes: AnIn VitroDemonstration
David Campos,Wenny Peeters,Kwangok Nickel,Brian Burkel,Johan Bussink,Randall J. Kimple,Albert van der Kogel,Kevin W. Eliceiri,Michael W. Kissick
Radiation Research. 2016; 185(5): 496
[Pubmed]  [Google Scholar] [DOI]
28 Oriented collagen fibers direct tumor cell intravasation
Weijing Han,Shaohua Chen,Wei Yuan,Qihui Fan,Jianxiang Tian,Xiaochen Wang,Longqing Chen,Xixiang Zhang,Weili Wei,Ruchuan Liu,Junle Qu,Yang Jiao,Robert H. Austin,Liyu Liu
Proceedings of the National Academy of Sciences. 2016; 113(40): 11208
[Pubmed]  [Google Scholar] [DOI]
29 Applications of Second-Harmonic Generation Imaging Microscopy in Ovarian and Breast Cancer
Karissa Tilbury,Paul J. Campagnola
Perspectives in Medicinal Chemistry. 2015; 7: PMC.S13214
[Pubmed]  [Google Scholar] [DOI]
30 Endogenous Optical Signals Reveal Changes of Elastin and Collagen Organization During Differentiation of Mouse Embryonic Stem Cells
Terra N. Thimm,Jayne M. Squirrell,Yuming Liu,Kevin W. Eliceiri,Brenda M. Ogle
Tissue Engineering Part C: Methods. 2015; 21(10): 995
[Pubmed]  [Google Scholar] [DOI]
31 Automated analysis of confocal laser endomicroscopy images to detect head and neck cancer
Andreas Dittberner,Erik Rodner,Wolfgang Ortmann,Joachim Stadler,Carsten Schmidt,Iver Petersen,Andreas Stallmach,Joachim Denzler,Orlando Guntinas-Lichius
Head & Neck. 2015; : n/a
[Pubmed]  [Google Scholar] [DOI]
32 Type III Collagen Directs Stromal Organization and Limits Metastasis in a Murine Model of Breast Cancer
Becky K. Brisson,Elizabeth A. Mauldin,Weiwei Lei,Laurie K. Vogel,Ashley M. Power,Albert Lo,Derek Dopkin,Chand Khanna,Rebecca G. Wells,Ellen Puré,Susan W. Volk
The American Journal of Pathology. 2015; 185(5): 1471
[Pubmed]  [Google Scholar] [DOI]
33 Disorganised stroma determined on pre-treatment breast cancer biopsies is associated with poor response to neoadjuvant chemotherapy: Results from the NEOZOTAC trial
T.J.A. Dekker,A. Charehbili,V.T.H.B.M. Smit,P. ten Dijke,E. Meershoek-Klein Kranenbarg,C.J.H. van de Velde,J.W.R. Nortier,R.A.E.M. Tollenaar,W.E. Mesker,J.R. Kroep
Molecular Oncology. 2015; 9(6): 1120
[Pubmed]  [Google Scholar] [DOI]
34 Rapid Quantification of 3D Collagen Fiber Alignment and Fiber Intersection Correlations with High Sensitivity
Meng Sun,Alexander B. Bloom,Muhammad H. Zaman,Arrate Muñoz-Barrutia
PLOS ONE. 2015; 10(7): e0131814
[Pubmed]  [Google Scholar] [DOI]
35 Breast Cancer Cell Line Aggregate Morphology Does Not Predict Invasive Capacity
Michelle J. Ziperstein,Asja Guzman,Laura J. Kaufman,Natarajan Aravindan
PLOS ONE. 2015; 10(9): e0139523
[Pubmed]  [Google Scholar] [DOI]


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