Journal of Pathology Informatics Journal of Pathology Informatics
Contact us | Home | Login   |  Users Online: 69  Print this pageEmail this pageSmall font sizeDefault font sizeIncrease font size 

    Article Cited by others


Color standardization in whole slide imaging using a color calibration slide

Bautista Pinky A, Hashimoto Noriaki, Yagi Yukako

Year : 2014| Volume: 5| Issue : 1 | Page no: 4-4

   This article has been cited by
1 A comprehensive review of computer-aided whole-slide image analysis: from datasets to feature extraction, segmentation, classification and detection approaches
Xintong Li, Chen Li, Md Mamunur Rahaman, Hongzan Sun, Xiaoqi Li, Jian Wu, Yudong Yao, Marcin Grzegorzek
Artificial Intelligence Review. 2022;
[Pubmed]  [Google Scholar] [DOI]
2 Breast histopathological image analysis using image processing techniques for diagnostic puposes: A methodological review
R Rashmi, Keerthana Prasad, Chethana Babu K Udupa
Journal of Medical Systems. 2022; 46(1)
[Pubmed]  [Google Scholar] [DOI]
3 Color Calibration Slide for Digital Microscopy Systems
D. S. Makhov, G. R. Sagatelyan, A. V. Samorodov
Measurement Techniques. 2022;
[Pubmed]  [Google Scholar] [DOI]
4 A digital pathology tool for quantification of color features in histologic specimens
Melanie Reschke, Jenna R. DiRito, David Stern, Wesley Day, Natalie Plebanek, Matthew Harris, Sarah A. Hosgood, Michael L. Nicholson, Danielle J. Haakinson, Xuchen Zhang, Wajahat Z. Mehal, Xinshou Ouyang, Jordan S. Pober, W. Mark Saltzman, Gregory T. Tietjen
Bioengineering & Translational Medicine. 2021;
[Pubmed]  [Google Scholar] [DOI]
5 The utility of color normalization for AI -based diagnosis of hematoxylin and eosin-stained pathology images
Jeffrey Boschman, Hossein Farahani, Amirali Darbandsari, Pouya Ahmadvand, Ashley Van Spankeren, David Farnell, Adrian B Levine, Julia R Naso, Andrew Churg, Steven JM Jones, Stephen Yip, Martin Köbel, David G Huntsman, C Blake Gilks, Ali Bashashati
The Journal of Pathology. 2021;
[Pubmed]  [Google Scholar] [DOI]
6 Prediction of HER2-positive breast cancer recurrence and metastasis risk from histopathological images and clinical information via multimodal deep learning
Jialiang Yang, Jie Ju, Lei Guo, Binbin Ji, Shufang Shi, Zixuan Yang, Songlin Gao, Xu Yuan, Geng Tian, Yuebin Liang, Peng Yuan
Computational and Structural Biotechnology Journal. 2021;
[Pubmed]  [Google Scholar] [DOI]
7 Tutorial: methods for three-dimensional visualization of archival tissue material
Tariq Sami Haddad, Peter Friedl, Navid Farahani, Darren Treanor, Inti Zlobec, Iris Nagtegaal
Nature Protocols. 2021; 16(11): 4945
[Pubmed]  [Google Scholar] [DOI]
8 Unpaired Stain Style Transfer Using Invertible Neural Networks Based on Channel Attention and Long-Range Residual
Junlin Lan, Shaojin Cai, Yuyang Xue, Qinquan Gao, Min Du, Hejun Zhang, Zhida Wu, Yanglin Deng, Yuxiu Huang, Tong Tong, Gang Chen
IEEE Access. 2021; 9: 11282
[Pubmed]  [Google Scholar] [DOI]
9 The Effect of Quality Control on Accuracy of Digital Pathology Image Analysis
Alexander I. Wright, Catriona M. Dunn, Michael Hale, Gordon G. A. Hutchins, Darren E. Treanor
IEEE Journal of Biomedical and Health Informatics. 2021; 25(2): 307
[Pubmed]  [Google Scholar] [DOI]
10 Wide-Field Pixel Super-Resolution Colour Lensfree Microscope for Digital Pathology
Guang Zeng, Jiahui He, Wenjian Qin
Frontiers in Oncology. 2021; 11
[Pubmed]  [Google Scholar] [DOI]
11 Deep Convolutional Neural Networks Detect Tumor Genotype from Pathological Tissue Images in Gastrointestinal Stromal Tumors
Cher-Wei Liang, Pei-Wei Fang, Hsuan-Ying Huang, Chung-Ming Lo
Cancers. 2021; 13(22): 5787
[Pubmed]  [Google Scholar] [DOI]
12 Role of AI and Histopathological Images in Detecting Prostate Cancer: A Survey
Sarah M. Ayyad, Mohamed Shehata, Ahmed Shalaby, Mohamed Abou El-Ghar, Mohammed Ghazal, Moumen El-Melegy, Nahla B. Abdel-Hamid, Labib M. Labib, H. Arafat Ali, Ayman El-Baz
Sensors. 2021; 21(8): 2586
[Pubmed]  [Google Scholar] [DOI]
13 Programmed cell death ligand 1 pathologist training in the time of COVID-19: Our experience using a digital solution
Dorothy Hayden, JosephM Herndon, JamesC Campion, JanineD Feng, Fangru Lian, JessicaL Baumann, BryanK Roland, EhabA ElGabry
Journal of Pathology Informatics. 2021; 12(1): 47
[Pubmed]  [Google Scholar] [DOI]
14 Whole Slide Imaging and Its Applications to Histopathological Studies of Liver Disorders
Rossana C. N. Melo, Maximilian W. D. Raas, Cinthia Palazzi, Vitor H. Neves, Kássia K. Malta, Thiago P. Silva
Frontiers in Medicine. 2020; 6
[Pubmed]  [Google Scholar] [DOI]
15 Ovarian Toxicity Assessment in Histopathological Images Using Deep Learning
Fangyao Hu, Leah Schutt, Cleopatra Kozlowski, Karen Regan, Noel Dybdal, Melissa M. Schutten
Toxicologic Pathology. 2020; 48(2): 350
[Pubmed]  [Google Scholar] [DOI]
16 Validation of machine learning models to detect amyloid pathologies across institutions
Juan C. Vizcarra, Marla Gearing, Michael J. Keiser, Jonathan D. Glass, Brittany N. Dugger, David A. Gutman
Acta Neuropathologica Communications. 2020; 8(1)
[Pubmed]  [Google Scholar] [DOI]
17 Hyperspectral and multispectral imaging in digital and computational pathology: a systematic review [Invited]
Samuel Ortega, Martin Halicek, Himar Fabelo, Gustavo M. Callico, Baowei Fei
Biomedical Optics Express. 2020; 11(6): 3195
[Pubmed]  [Google Scholar] [DOI]
18 Color lens-free imaging using multi-wavelength illumination based phase retrieval
Jasper Mariën, Richard Stahl, Andy Lambrechts, Chris van Hoof, Abdulkadir Yurt
Optics Express. 2020; 28(22): 33002
[Pubmed]  [Google Scholar] [DOI]
19 Whole Slide Imaging: Technology and Applications
Matthew G. Hanna, Anil Parwani, Sahussapont Joseph Sirintrapun
Advances in Anatomic Pathology. 2020; 27(4): 251
[Pubmed]  [Google Scholar] [DOI]
20 Toxicologic Pathology Forum*: Opinion on Considerations for the Use of Whole Slide Images in GLP Pathology Peer Review
Alys Bradley, Matt Jacobsen
Toxicologic Pathology. 2019; 47(2): 100
[Pubmed]  [Google Scholar] [DOI]
21 Histo-genomics: digital pathology at the forefront of precision medicine
Ivraym Barsoum, Eriny Tawedrous, Hala Faragalla, George M. Yousef
Diagnosis. 2019; 6(3): 203
[Pubmed]  [Google Scholar] [DOI]
22 Comparison of a Medical-Grade Monitor vs Commercial Off-the-Shelf Display for Mitotic Figure Enumeration and Small Object (Helicobacter pylori) Detection
Andrew P Norgan,Vera J Suman,Charlene L Brown,Thomas J Flotte,Taofic Mounajjed
American Journal of Clinical Pathology. 2018; 149(2): 181
[Pubmed]  [Google Scholar] [DOI]
23 A Survey of Methods for 3D Histology Reconstruction
Jonas Pichat,Juan Eugenio Iglesias,Tarek Yousry,Sébastien Ourselin,Marc Modat
Medical Image Analysis. 2018;
[Pubmed]  [Google Scholar] [DOI]
24 Visually Meaningful Histopathological Features for Automatic Grading of Prostate Cancer
M. Khalid Khan Niazi,Keluo Yao,Debra L. Zynger,Steven K. Clinton,James Chen,Mehmet Koyuturk,Thomas LaFramboise,Metin Gurcan
IEEE Journal of Biomedical and Health Informatics. 2017; 21(4): 1027
[Pubmed]  [Google Scholar] [DOI]
25 Development of a novel tissue-mimicking color calibration slide for digital microscopy
Emily L. Clarke,Craig Revie,David Brettle,Michael Shires,Peter Jackson,Ravinder Cochrane,Robert Wilson,Claudia Mello-Thoms,Darren Treanor
Color Research & Application. 2017;
[Pubmed]  [Google Scholar] [DOI]
26 An optimized image analysis algorithm for detecting nuclear signals in digital whole slides for histopathology
Róbert Paulik,Tamás Micsik,Gábor Kiszler,Péter Kaszál,János Székely,Norbert Paulik,Eszter Várhalmi,Viktória Prémusz,Tibor Krenács,Béla Molnár
Cytometry Part A. 2017; 91(6): 595
[Pubmed]  [Google Scholar] [DOI]
27 Automatic quantification of IHC stain in breast TMA using colour analysis
M. Milagro Fernández-Carrobles,Gloria Bueno,Marcial García-Rojo,Lucía González-López,Carlos López,Oscar Déniz
Computerized Medical Imaging and Graphics. 2017;
[Pubmed]  [Google Scholar] [DOI]
28 An alternative reference space for H&E color normalization
Mark D. Zarella,Chan Yeoh,David E. Breen,Fernando U. Garcia,Abhijit De
PLOS ONE. 2017; 12(3): e0174489
[Pubmed]  [Google Scholar] [DOI]
29 The Pathologist 2.0: An Update on Digital Pathology in Veterinary Medicine
Christof A. Bertram,Robert Klopfleisch
Veterinary Pathology. 2017; 54(5): 756
[Pubmed]  [Google Scholar] [DOI]
30 Digital pathology in clinical use: where are we now and what is holding us back?
Jon Griffin,Darren Treanor
Histopathology. 2017; 70(1): 134
[Pubmed]  [Google Scholar] [DOI]
31 Colour in digital pathology: a review
Emily L Clarke,Darren Treanor
Histopathology. 2017; 70(2): 153
[Pubmed]  [Google Scholar] [DOI]
32 Accurate representation of interference colours (Michel-Lévy chart): from rendering to image colour correction
Journal of Microscopy. 2017;
[Pubmed]  [Google Scholar] [DOI]
33 Triaging Diagnostically Relevant Regions from Pathology Whole Slides of Breast Cancer: A Texture Based Approach
Mohammad Peikari,Mehrdad J. Gangeh,Judit Zubovits,Gina Clarke,Anne L. Martel
IEEE Transactions on Medical Imaging. 2016; 35(1): 307
[Pubmed]  [Google Scholar] [DOI]
34 Stain Specific Standardization of Whole-Slide Histopathological Images
Babak Ehteshami Bejnordi,Geert Litjens,Nadya Timofeeva,Irene Otte-Holler,Andre Homeyer,Nico Karssemeijer,Jeroen AWM van der Laak
IEEE Transactions on Medical Imaging. 2016; 35(2): 404
[Pubmed]  [Google Scholar] [DOI]
35 Structure-Preserving Color Normalization and Sparse Stain Separation for Histological Images
Abhishek Vahadane,Tingying Peng,Amit Sethi,Shadi Albarqouni,Lichao Wang,Maximilian Baust,Katja Steiger,Anna Melissa Schlitter,Irene Esposito,Nassir Navab
IEEE Transactions on Medical Imaging. 2016; 35(8): 1962
[Pubmed]  [Google Scholar] [DOI]
36 Practical Application of Digital Images in Pathology:
IEICE ESS Fundamentals Review. 2016; 9(3): 214
[Pubmed]  [Google Scholar] [DOI]
37 Difference of the Nuclear Green Light Intensity between Papillary Carcinoma Cells Showing Clear Nuclei and Non-neoplastic Follicular Epithelia in Papillary Thyroid Carcinoma
Hyekyung Lee,Tae Hwa Baek,Meeja Park,Seung Yun Lee,Hyun Jin Son,Dong Wook Kang,Joo Heon Kim,Soo Young Kim
Journal of Pathology and Translational Medicine. 2016; 50(5): 355
[Pubmed]  [Google Scholar] [DOI]
38 The College of American Pathologists Guidelines for Whole Slide Imaging Validation Are Feasible for Pediatric Pathology: A Pediatric Pathology Practice Experience
Michael A. Arnold,Emily Chenever,Peter B. Baker,Daniel R. Boué,Bonita Fung,Sue Hammond,Brett W. Hendrickson,Samir B. Kahwash,Christopher R. Pierson,Vinay Prasad,Kathleen K. Nicol,Thomas Barr
Pediatric and Developmental Pathology. 2015; 18(2): 109
[Pubmed]  [Google Scholar] [DOI]
39 New Colors for Histology: Optimized Bivariate Color Maps Increase Perceptual Contrast in Histological Images
Jakob Nikolas Kather,Cleo-Aron Weis,Alexander Marx,Alexander K. Schuster,Lothar R. Schad,Frank Gerrit Zöllner,Jonathan A Coles
PLOS ONE. 2015; 10(12): e0145572
[Pubmed]  [Google Scholar] [DOI]
40 Staining Correction in Digital Pathology by Utilizing a Dye Amount Table
Pinky A. Bautista,Yukako Yagi
Journal of Digital Imaging. 2015; 28(3): 283
[Pubmed]  [Google Scholar] [DOI]
41 Novel genotype-phenotype associations in human cancers enabled by advanced molecular platforms and computational analysis of whole slide images
Lee AD Cooper,Jun Kong,David A Gutman,William D Dunn,Michael Nalisnik,Daniel J Brat
Laboratory Investigation. 2015; 95(4): 366
[Pubmed]  [Google Scholar] [DOI]
42 ATA Clinical Guidelines for Telepathology
Liron Pantanowitz,Kim Dickinson,Andrew J. Evans,Lewis A. Hassell,Walter H. Henricks,Jochen K. Lennerz,Amanda Lowe,Anil V. Parwani,Michael Riben,COL Daniel Smith,J. Mark Tuthill,Ronald S. Weinstein,David C. Wilbur,Elizabeth A. Krupinski,Jordana Bernard
Telemedicine and e-Health. 2014; 20(11): 1049
[Pubmed]  [Google Scholar] [DOI]


Read this article