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Tutorial: methods for three-dimensional visualization of archival tissue material |
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| Tariq Sami Haddad, Peter Friedl, Navid Farahani, Darren Treanor, Inti Zlobec, Iris Nagtegaal |
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Virtual reality for 3D histology: multi-scale visualization of organs with interactive feature exploration |
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| Kaisa Liimatainen, Leena Latonen, Masi Valkonen, Kimmo Kartasalo, Pekka Ruusuvuori |
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Improving algorithm for the alignment of consecutive, whole-slide, immunohistochemical section Images |
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| Cher-Wei Liang, Ruey-Feng Chang, Pei-Wei Fang, Chiao-Min Chen |
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| Journal of Pathology Informatics. 2021; 12(1): 29 |
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Three-Dimensional Approaches in Histopathological Tissue Clearing System |
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| Tae Bok Lee, Jaewang Lee, Jin Hyun Jun |
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| The Korean Journal of Clinical Laboratory Science. 2020; 52(1): 1 |
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| Masami Ando, Rajiv Gupta, Akari Iwakoshi, Jong-Ki Kim, Daisuke Shimao, Hiroshi Sugiyama, Naoki Sunaguchi, Tetsuya Yuasa, Shu Ichihara |
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| Eunjung Min, Sungbea Ban, Junwon Lee, Andrey Vavilin, Songyee Baek, Sunwoo Jung, Yujin Ahn, Kibeom Park, Sungwon Shin, SoHyun Han, Hyungjoon Cho, Whaseon Lee-Kwon, Jeehyun Kim, C. Justin Lee, Woonggyu Jung |
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| Scientific Reports. 2020; 10(1) |
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Cryogenic sequenced layering for the 3D reconstruction of biological objects |
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| Vladimir Nikolaevich Nikolenko, Alexey Anatolyevich Terpilovsky, Alexey Leonidovich Kuzmin, Regina Alekseevna Lukashkina, Alexey Evgenievich Strizhkov, Andrei Vladimirovich Suslov, Ekaterina Vladimirovna Kochurova, Liliya Vladimirovna Gavrushova, Mikhail Yegorovich Sinelnikov |
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Interactive Visualization of 3D Histopathology in Native Resolution |
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| Martin Falk, Anders Ynnerman, Darren Treanor, Claes Lundstrom |
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| IEEE Transactions on Visualization and Computer Graphics. 2019; 25(1): 1008 |
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Histopathology: ditch the slides, because digital and 3D are on show |
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| Ilaria Jansen,Marit Lucas,C. Dilara Savci-Heijink,Sybren L. Meijer,Henk A. Marquering,Daniel M. de Bruin,Patricia J. Zondervan |
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A Survey of Methods for 3D Histology Reconstruction |
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| Jonas Pichat,Juan Eugenio Iglesias,Tarek Yousry,Sébastien Ourselin,Marc Modat |
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A Tool for Brain-Wide Quantitative Analysis of Molecular Data upon Projection into a Planar View of Choice |
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| Samme Vreysen,Isabelle Scheyltjens,Marie-Eve Laramée,Lutgarde Arckens |
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| Frontiers in Neuroanatomy. 2017; 11 |
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Hyper-Stain Inspector: A Framework for Robust Registration and Localised Co-Expression Analysis of Multiple Whole-Slide Images of Serial Histology Sections |
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| Nicholas Trahearn,David Epstein,Ian Cree,David Snead,Nasir Rajpoot |
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| Scientific Reports. 2017; 7(1) |
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Pathways to clinical CLARITY: volumetric analysis of irregular, soft, and heterogeneous tissues in development and disease |
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| Brian Hsueh,Vanessa M. Burns,Philip Pauerstein,Katherine Holzem,Li Ye,Kristin Engberg,Ai-Chi Wang,Xueying Gu,Harini Chakravarthy,H. Efsun Arda,Gregory Charville,Hannes Vogel,Igor R. Efimov,Seung Kim,Karl Deisseroth |
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| Konrad Kölble,Ingmar Blümcke |
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Transformation diffusion reconstruction of three-dimensional histology volumes from two-dimensional image stacks |
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| Ramón Casero,Urszula Siedlecka,Elizabeth S. Jones,Lena Gruscheski,Matthew Gibb,Jürgen E. Schneider,Peter Kohl,Vicente Grau |
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Three-dimensional reconstruction with serial whole-mount sections of oral tongue squamous cell carcinoma: A preliminary study |
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| Yujia Wang,Sheng Chen,Yanhong Ni,Derek Magee,Yumei Pu,Qian Zhou,Zhiyong Wang,Lei Zhang,Xiaofeng Huang,Qingang Hu |
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