Journal of Pathology Informatics Journal of Pathology Informatics
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Original Article: Effects of image quantity and image source variation on machine learning histology differential diagnosis models
Elham Vali-Betts, Kevin J Krause, Alanna Dubrovsky, Kristin Olson, John Paul Graff, Anupam Mitra, Ananya Datta-Mitra, Kenneth Beck, Aristotelis Tsirigos, Cynthia Loomis, Antonio Galvao Neto, Esther Adler, Hooman H Rashidi
J Pathol Inform 2021, 12:5 (23 January 2021)
DOI:10.4103/jpi.jpi_69_20  
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Research Article: Verification and validation of digital pathology (whole slide imaging) for primary histopathological diagnosis: All wales experience
M Babawale, A Gunavardhan, J Walker, T Corfield, P Huey, A Savage, A Bansal, M Atkinson, H Abdelsalam, E Raweily, A Christian, I Evangelou, D Thomas, J Shannon, E Youd, P Brumwell, J Harrison, I Thompson, M Rashid, G Leopold, A Finall, S Roberts, D Housa, P Nedeva, A Davies, D Fletcher, Muhammad Aslam
J Pathol Inform 2021, 12:4 (23 January 2021)
DOI:10.4103/jpi.jpi_55_20  
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Original Article: Remote reporting from home for primary diagnosis in surgical pathology: A tertiary oncology center experience during the COVID-19 pandemic
Vidya Rao, Rajiv Kumar, Sathyanarayanan Rajaganesan, Swapnil Rane, Gauri Deshpande, Subhash Yadav, Asawari Patil, Trupti Pai, Santosh Menon, Aekta Shah, Katha Rabade, Mukta Ramadwar, Poonam Panjwani, Neha Mittal, Ayushi Sahay, Bharat Rekhi, Munita Bal, Uma Sakhadeo, Sumeet Gujral, Sangeeta Desai
J Pathol Inform 2021, 12:3 (8 January 2021)
DOI:10.4103/jpi.jpi_72_20  
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Technical Note: Implementation of collodion bag protocol to improve whole-slide imaging of scant gynecologic curettage specimens
Iny Jhun, David Levy, Harumi Lim, Quintina Herrera, Erika Dobo, Dominique Burns, William Hetherington, Ronald Macasaet, April J Young, Christina S Kong, Ann K Folkins, Eric Joon Yang
J Pathol Inform 2021, 12:2 (8 January 2021)
DOI:10.4103/jpi.jpi_82_20  
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Letters: Digital slides as an effective tool for programmed death ligand 1 combined positive score assessment and training: Lessons learned from the “Programmed death ligand 1 key learning program in Head-and-Neck squamous cell carcinoma”
Albino Eccher, Gabriella Fontanini, Nicola Fusco, Ilaria Girolami, Paolo Graziano, Elena Guerini Rocco, Maurizio Martini, Patrizia Morbini, Liron Pantanowitz, Anil Parwani, Anna Maria Pisano, Giancarlo Troncone, Elena Vigliar
J Pathol Inform 2021, 12:1 (8 January 2021)
DOI:10.4103/jpi.jpi_63_20  
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Original Article: DeepCIN: Attention-based cervical histology image classification with sequential feature modeling for pathologist-level accuracy
Sudhir Sornapudi, R Joe Stanley, William V Stoecker, Rodney Long, Zhiyun Xue, Rosemary Zuna, Shellaine R Frazier, Sameer Antani
J Pathol Inform 2020, 11:40 (24 December 2020)
DOI:10.4103/jpi.jpi_50_20  
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Technical Note: A novel web application for rapidly searching the diagnostic case archive
Scott Robertson
J Pathol Inform 2020, 11:39 (24 December 2020)
DOI:10.4103/jpi.jpi_43_20  
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Research Article: Constellation loss: Improving the efficiency of deep metric learning loss functions for the optimal embedding of histopathological images
Alfonso Medela, Artzai Picon
J Pathol Inform 2020, 11:38 (26 November 2020)
DOI:10.4103/jpi.jpi_41_20  
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Original Article: Using image registration and machine learning to develop a workstation tool for rapid analysis of glomeruli in medical renal biopsies
David C Wilbur, Jason R Pettus, Maxwell L Smith, Lynn D Cornell, Alexander Andryushkin, Richard Wingard, Eric Wirch
J Pathol Inform 2020, 11:37 (7 November 2020)
DOI:10.4103/jpi.jpi_49_20  
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Research Article: Reproducible color gamut of hematoxylin and eosin stained images in standard color spaces
Wei- Chung Cheng
J Pathol Inform 2020, 11:36 (6 November 2020)
DOI:10.4103/jpi.jpi_59_19  
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Research Article: Computerized image analysis of tumor cell nuclear morphology can improve patient selection for clinical trials in localized clear cell renal cell carcinoma
In Hwa Um, Lindesay Scott-Hayward, Monique Mackenzie, Puay Hoon Tan, Ravindran Kanesvaran, Yukti Choudhury, Peter D Caie, Min-Han Tan, Marie O’Donnell, Steve Leung, Grant D Stewart, David J Harrison
J Pathol Inform 2020, 11:35 (6 November 2020)
DOI:10.4103/jpi.jpi_13_20  
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Book Review: Review of “artificial intelligence and deep learning in pathology” by Stanley Cohen
Jerome Cheng
J Pathol Inform 2020, 11:34 (6 November 2020)
DOI:10.4103/jpi.jpi_66_20  
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Technical Note: (Re) Defining the high-power field for digital pathology
David Kim, Liron Pantanowitz, Peter Schüffler, Dig Vijay Kumar Yarlagadda, Orly Ardon, Victor E Reuter, Meera Hameed, David S Klimstra, Matthew G Hanna
J Pathol Inform 2020, 11:33 (9 October 2020)
DOI:10.4103/jpi.jpi_48_20  
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Original Article: Comparing deep learning and immunohistochemistry in determining the site of origin for well-differentiated neuroendocrine tumors
Jordan Redemann, Fred A Schultz, Cathy Martinez, Michael Harrell, Douglas P Clark, David R Martin, Joshua A Hanson
J Pathol Inform 2020, 11:32 (9 October 2020)
DOI:10.4103/jpi.jpi_37_20  
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Original Article: UniTwain: A cost-effective solution for lean gross imaging
Hansen Lam, Ricky Kwan, Mark Tuthill, Mehrvash Haghighi
J Pathol Inform 2020, 11:31 (5 October 2020)
DOI:10.4103/jpi.jpi_42_20  
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ABSTRACTS: What did we expect from Porto's ECDP2020

J Pathol Inform 2020, 11:30 (18 September 2020)
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Original Article: ImageBox 2 – Efficient and rapid access of image tiles from whole-slide images using serverless HTTP range requests
Erich Bremer, Joel Saltz, Jonas S Almeida
J Pathol Inform 2020, 11:29 (10 September 2020)
DOI:10.4103/jpi.jpi_31_20  
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Original Article: Colorectal cancer detection based on deep learning
Lin Xu, Blair Walker, Peir-In Liang, Yi Tong, Cheng Xu, Yu Chun Su, Aly Karsan
J Pathol Inform 2020, 11:28 (21 August 2020)
DOI:10.4103/jpi.jpi_68_19  
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Research Article: TissueWand, a rapid histopathology annotation tool
Martin Lindvall, Alexander Sanner, Fredrik Petré, Karin Lindman, Darren Treanor, Claes Lundström, Jonas Löwgren
J Pathol Inform 2020, 11:27 (21 August 2020)
DOI:10.4103/jpi.jpi_5_20  
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Original Article: LibMI: An open source library for efficient histopathological image processing
Yuxin Dong, Pargorn Puttapirat, Jingyi Deng, Xiangrong Zhang, Chen Li
J Pathol Inform 2020, 11:26 (21 August 2020)
DOI:10.4103/jpi.jpi_11_20  
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Editorial: A synoptic electronic order set for placental pathology: A framework extensible to nonneoplastic pathology
Adela Cimic, Maria Mironova, Scarlett Karakash, Sahussapont Joseph Sirintrapun
J Pathol Inform 2020, 11:25 (21 August 2020)
DOI:10.4103/jpi.jpi_24_20  
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Letters: Digital pathology during a pandemic
Aleksandar Vodovnik, Tonje Bøyum Riste, Bjørn Ståle Sund
J Pathol Inform 2020, 11:24 (11 August 2020)
DOI:10.4103/jpi.jpi_44_20  
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Review Article: Display characteristics and their impact on digital pathology: A current review of pathologists' future “microscope”
Jacob T Abel, Peter Ouillette, Christopher L Williams, John Blau, Jerome Cheng, Keluo Yao, Winston Y Lee, Toby C Cornish, Ulysses G J Balis, David S McClintock
J Pathol Inform 2020, 11:23 (10 August 2020)
DOI:10.4103/jpi.jpi_38_20  
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Original Article: A regulatory science initiative to harmonize and standardize digital pathology and machine learning processes to speed up clinical innovation to patients Highly accessed article
Hetal Desai Marble, Richard Huang, Sarah Nixon Dudgeon, Amanda Lowe, Markus D Herrmann, Scott Blakely, Matthew O Leavitt, Mike Isaacs, Matthew G Hanna, Ashish Sharma, Jithesh Veetil, Pamela Goldberg, Joachim H Schmid, Laura Lasiter, Brandon D Gallas, Esther Abels, Jochen K Lennerz
J Pathol Inform 2020, 11:22 (6 August 2020)
DOI:10.4103/jpi.jpi_27_20  
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Original Article: Improving critical value notification through secure text messaging
Terrance James Lynn, Jordan Erik Olson
J Pathol Inform 2020, 11:21 (6 August 2020)
DOI:10.4103/jpi.jpi_19_20  
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Original Article: Whole-slide imaging allows pathologists to work remotely in regions with severe logistical constraints due to Covid-19 pandemic
Daniel S Liscia, Donata Bellis, Elena Biletta, Mariangela D’Andrea, Giorgio A Croci, Umberto Dianzani
J Pathol Inform 2020, 11:20 (28 July 2020)
DOI:10.4103/jpi.jpi_32_20  
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Research Article: Deep learning to estimate human epidermal growth factor receptor 2 status from hematoxylin and eosin-stained breast tissue images
Deepak Anand, Nikhil Cherian Kurian, Shubham Dhage, Neeraj Kumar, Swapnil Rane, Peter H Gann, Amit Sethi
J Pathol Inform 2020, 11:19 (24 July 2020)
DOI:10.4103/jpi.jpi_10_20  
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Commentary: Commentary: Impact of digital pathology in the field of intraoperative neuropathology: Master the tool
Albino Eccher, Ilaria Girolami
J Pathol Inform 2020, 11:18 (16 July 2020)
DOI:10.4103/jpi.jpi_39_20  
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Technical Note: A point-of-use quality assurance tool for digital pathology remote working
Alexander I Wright, Emily L Clarke, Catriona M Dunn, Bethany J Williams, Darren E Treanor, David S Brettle
J Pathol Inform 2020, 11:17 (16 July 2020)
DOI:10.4103/jpi.jpi_25_20  
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Editorial: Is the time right to start using digital pathology and artificial intelligence for the diagnosis of lymphoma?
Mohamed E Salama, William R Macon, Liron Pantanowitz
J Pathol Inform 2020, 11:16 (26 June 2020)
DOI:10.4103/jpi.jpi_16_20  
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Editorial: The future of pathology: What can we learn from the COVID-19 pandemic?
Bethany J Williams, Filippo Fraggetta, Matthew G Hanna, Richard Huang, Jochen Lennerz, Roberto Salgado, S Joseph Sirintrapun, Liron Pantanowitz, Anil Parwani, Mark Zarella, Darren E Treanor
J Pathol Inform 2020, 11:15 (9 June 2020)
DOI:10.4103/jpi.jpi_29_20  
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Research Article: Bridging the collaboration gap: Real-time identification of clinical specimens for biomedical research
Thomas J S Durant, Guannan Gong, Nathan Price, Wade L Schulz
J Pathol Inform 2020, 11:14 (20 May 2020)
DOI:10.4103/jpi.jpi_15_20  
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Original Article: The next generation robotic microscopy for intraoperative teleneuropathology consultation
Swikrity Upadhyay Baskota, Clayton Wiley, Liron Pantanowitz
J Pathol Inform 2020, 11:13 (23 April 2020)
DOI:10.4103/jpi.jpi_2_20  
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Guidelines: Guidance for remote reporting of digital pathology slides during periods of exceptional service pressure: An emergency response from the UK royal college of pathologists Highly accessed article
Bethany Jill Williams, David Brettle, Muhammad Aslam, Paul Barrett, Gareth Bryson, Simon Cross, David Snead, Clare Verrill, Emily Clarke, Alexander Wright, Darren Treanor
J Pathol Inform 2020, 11:12 (17 April 2020)
DOI:10.4103/jpi.jpi_23_20  
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Erratum: Erratum: Guidelines from the Canadian Association of Pathologists for Establishing a Telepathology Service for Anatomic Pathology Using Whole-slide Imaging

J Pathol Inform 2020, 11:11 (10 April 2020)
DOI:10.4103/2153-3539.282276  
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Original Article: EpithNet: Deep regression for epithelium segmentation in cervical histology images
Sudhir Sornapudi, Jason Hagerty, R Joe Stanley, William V Stoecker, Rodney Long, Sameer Antani, George Thoma, Rosemary Zuna, Shellaine R Frazier
J Pathol Inform 2020, 11:10 (30 March 2020)
DOI:10.4103/jpi.jpi_53_19  
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Original Article: Individualized bayesian risk assessment for cervical squamous neoplasia
Lama F Farchoukh, Agnieszka Onisko, R Marshall Austin
J Pathol Inform 2020, 11:9 (30 March 2020)
DOI:10.4103/jpi.jpi_66_19  
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Brief Report: Value-Based intervention with hospital and pathology laboratory informatics: A case of analytics and outreach at the veterans affairs
Gregory D Scott, Thomas F Osborne, Sang P Gross, Dean Fong
J Pathol Inform 2020, 11:8 (9 March 2020)
DOI:10.4103/jpi.jpi_67_19  
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Editorial: Value of public challenges for the development of pathology deep learning algorithms
Douglas Joseph Hartman, Jeroen A. W. M. Van Der Laak, Metin N Gurcan, Liron Pantanowitz
J Pathol Inform 2020, 11:7 (26 February 2020)
DOI:10.4103/jpi.jpi_64_19  
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Original Article: Payment reform in the era of advanced diagnostics, artificial intelligence, and machine learning
James Sorace
J Pathol Inform 2020, 11:6 (21 February 2020)
DOI:10.4103/jpi.jpi_63_19  
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Original Article: Limited number of cases may yield generalizable models, a proof of concept in deep learning for colon histology
Lorne Holland, Dongguang Wei, Kristin A Olson, Anupam Mitra, John Paul Graff, Andrew D Jones, Blythe Durbin-Johnson, Ananya Datta Mitra, Hooman H Rashidi
J Pathol Inform 2020, 11:5 (21 February 2020)
DOI:10.4103/jpi.jpi_49_19  
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Original Article: Artificial intelligence-driven structurization of diagnostic information in free-text pathology reports
Pericles S Giannaris, Zainab Al-Taie, Mikhail Kovalenko, Nattapon Thanintorn, Olha Kholod, Yulia Innokenteva, Emily Coberly, Shellaine Frazier, Katsiarina Laziuk, Mihail Popescu, Chi-Ren Shyu, Dong Xu, Richard D Hammer, Dmitriy Shin
J Pathol Inform 2020, 11:4 (11 February 2020)
DOI:10.4103/jpi.jpi_30_19  
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Original Article: Precise identification of cell and tissue features important for histopathologic diagnosis by a whole slide imaging system
Thomas W Bauer, Cynthia Behling, Dylan V Miller, Bernard S Chang, Elena Viktorova, Robert Magari, Perry E Jensen, Keith A Wharton, Jinsong Qiu
J Pathol Inform 2020, 11:3 (6 February 2020)
DOI:10.4103/jpi.jpi_47_19  
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Research Article: A validation study of human epidermal growth factor receptor 2 immunohistochemistry digital imaging analysis and its correlation with human epidermal growth factor receptor 2 fluorescence In situ hybridization results in breast carcinoma
Ramon Hartage, Aidan C Li, Scott Hammond, Anil V Parwani
J Pathol Inform 2020, 11:2 (4 February 2020)
DOI:10.4103/jpi.jpi_52_19  
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ABSTRACTS: Pathology Vision 2019 Highly accessed article

J Pathol Inform 2020, 11:1 (20 January 2020)
DOI:10.4103/2153-3539.276115  
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